| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3382 |
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| Symbol | |
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| ID | 5540881 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4410002 |
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| End bp | 4411498 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895500 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain N |
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| Protein accession | YP_001433450 |
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| Protein GI | 156743321 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1007] NADH:ubiquinone oxidoreductase subunit 2 (chain N) |
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| TIGRFAM ID | [TIGR01770] proton-translocating NADH-quinone oxidoreductase, chain N |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAATG ACACACAGAT GACCGAAATC GTGATTCCTC CTGTTGACTG GCGCGTGGCG
ACGCAACTCA GCATCATCTT TGGCTGGGCG TCGGTGTTGC TGGTCATTGC CTTGTTTGTG
CCACGTTCAC GTACCCGGAT CGTCGGGTAT CTGGCGATGG TGGGCGCGAT GGTTGCTGCG
GCAGTTGGTA TTCCGCTGTG GGGCGTCAAC GCCGAGACCT TCAGCGGCAT GCTGCGGCTA
GACTCCTATA GCCTGACGCT GAACTGGTTG TTTCTGGCAG CGGCTGCCAT AACCATGGTG
CTGTCGCTCG ACTATCTGCC ACGCCAGGGA ATCGAGCGAA GCGAGTATTA CGTGCTGGTG
CTGTTCGCCA CCGGTGGCAT GATGTTGCTG GCGCAGGGCG CGGACCTGAT CATTCTCTTT
CTGGGTCTGG AACTGCTGTC AATTGTGCTG TATGTGCTGA CCGGCTTCGC CTATCCGCGC
AACGCTTCGG AAGAAGCAGG GATGAAATAT CTGCTGATCG GCGCATTCGC GGGCGGGTTC
GTCGTGTTTG GCATTGCTCT GCTGTATGGA GCGACCGGCA GCATGAATCT GCGCGCCATT
GGTGAGACGC TGGCACAACA GACGTTGACT CTCGAAGAAC GCATCTATCT GCTGGCGGGT
GCGGCACTGG TCGTCGTTGG TTTTGGCTAC AAGGTTGCAA TGGCGCCATT CCATATGTGG
GCGCCGGATG TCTATGAAGG CGCACCGACG CCGATAGCCG GGCTGCTCTC GGTCGGTAGC
AAGGCAGCAG GGTTTGCGGC GCTCCTGCGG TTCCTGGTCG AGGCGCTGGC GGGCGAGTGG
CAGATCTGGG CGCCGGTGCT GGCGGTGCTG GCGATTGCAA CACTGGCGGT CGGGAATATC
GGTGCGCTGA CGCAACGCAA CGTCAAGCGC ATGCTGGCGT ATTCGAGCAT CGGTCACGCC
GGGTACATCC TGTTCGGCGT GATTGCCGCC GGCGCGCCGG GTGGCATTGC CGGGCAACGC
GGCGTTGAAG GCGTTCTTCT GTACCTGATT GCATACACCT TTACTAATCT CGGAGCGTTT
GGCGTATTGA TCGCTCTCGA ACATCGCGGC GAAGCAGCCT GGGATATGAG CGATCTGGCA
GGGTTGTGGA GTCGGCGTCC CTGGCTGGCG GTCGCCATGG CAGTTTGTAT GCTCTCGCTG
GCTGGCGTCC CGCCGACCGG TGGTTTCTGG GGGAAGTTCT ATGTGTTCAC TGCCGCCTGG
CTGTCGGGCA TGGGCTGGAT CACAGTCATT GGGGTCATTG TTGCCGCAAT TGCGGCATTC
TACTATCTCC GCATTGTGGC GCAGATGTTC ATGGCGGAAC CGGCGCGCGA GGTGCCCTTG
CCTATGGACC GCGCCCTGCG GGCAGGTCTT GCGCTCGCAA CGCTCGGTGT GCTGATCCTG
GGCTTTCTCC CAACGCCTGC GATTGACCTG GTGCAGCGGG TGGTGTTAGG GGGTTAG
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| Protein sequence | MWNDTQMTEI VIPPVDWRVA TQLSIIFGWA SVLLVIALFV PRSRTRIVGY LAMVGAMVAA
AVGIPLWGVN AETFSGMLRL DSYSLTLNWL FLAAAAITMV LSLDYLPRQG IERSEYYVLV
LFATGGMMLL AQGADLIILF LGLELLSIVL YVLTGFAYPR NASEEAGMKY LLIGAFAGGF
VVFGIALLYG ATGSMNLRAI GETLAQQTLT LEERIYLLAG AALVVVGFGY KVAMAPFHMW
APDVYEGAPT PIAGLLSVGS KAAGFAALLR FLVEALAGEW QIWAPVLAVL AIATLAVGNI
GALTQRNVKR MLAYSSIGHA GYILFGVIAA GAPGGIAGQR GVEGVLLYLI AYTFTNLGAF
GVLIALEHRG EAAWDMSDLA GLWSRRPWLA VAMAVCMLSL AGVPPTGGFW GKFYVFTAAW
LSGMGWITVI GVIVAAIAAF YYLRIVAQMF MAEPAREVPL PMDRALRAGL ALATLGVLIL
GFLPTPAIDL VQRVVLGG
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