Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3377 |
Symbol | |
ID | 5540876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4406893 |
End bp | 4407714 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640895495 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001433445 |
Protein GI | 156743316 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGA TACGGGTAAA CGGAGCGACC ATTTCCTACG AGGAACACGG AACCGGTCCT GAAACAATTG TGTTTGCACA CGGTTTGCTG TGGAGCGGAC GCATGTTCGA TCATCAGGTC AACGCGCTCA AGGATCGGTA TCGGTGCATT ACCTTCGACT TTCGCGGGCA GGGGCAAAGC GAAGTGACCG ACTCAGGATA CGACATGGAC ACCCTTACGA ACGATGCAGC GGCGCTGATC GAAGCGCTGC ACGCCGCTCC CTGTCACTTC GTCGGTCTCT CGATGGGTGG GTTTGTCGGC ATGCGACTGG CGATCCGCCG TCCTGATCTG ATCCGATCAC TCATTCTGCT GGAAACCTCA GCCGACCCGG AACCACGCGA GAATGTGGGG CGGTACCGCC TGCTCAATTT CATTGCGCGC TGGTTGGGGT TGCGATTGGT TGCCGATCAG GTGATGCCGA TCATGTTCGG CAAAACGTTT CTGACCGATC CAAACCGCGC ACAGGAGCGA GCAATGTGGC GCAAACGGAT GACCGCCAAT CACCGAATCG GCATCTCGCG CGCCGTGCGG GGCGTCATTG AGCGACAGGG GGTGTATGAG CAGATCGACC GGATCACAGC GCCAACGCTC ATCATCGTCG GCGATCAGGA CGTAGCGACC CCACCCGACA AAGCCCGACG CATATTCGAG CGCATCCCCC ACTCGTCTCT GATCGTCATC CCCGGTGCGG GACACACATC CACAGTCGAG GCGCCTGAAA CTGTAAACAC ACTGCTGCGG CGATTCCTCG ATGCACACGC GGACAATGGC TCGCAACGCT GA
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Protein sequence | MPEIRVNGAT ISYEEHGTGP ETIVFAHGLL WSGRMFDHQV NALKDRYRCI TFDFRGQGQS EVTDSGYDMD TLTNDAAALI EALHAAPCHF VGLSMGGFVG MRLAIRRPDL IRSLILLETS ADPEPRENVG RYRLLNFIAR WLGLRLVADQ VMPIMFGKTF LTDPNRAQER AMWRKRMTAN HRIGISRAVR GVIERQGVYE QIDRITAPTL IIVGDQDVAT PPDKARRIFE RIPHSSLIVI PGAGHTSTVE APETVNTLLR RFLDAHADNG SQR
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