Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3375 |
Symbol | |
ID | 5540874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4403707 |
End bp | 4404444 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640895493 |
Product | hypothetical protein |
Protein accession | YP_001433443 |
Protein GI | 156743314 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCGA CAACGATGGA GCAGACGCGC GCCATCGTGT ATCCCGAAAG TGATGGTCAG CCGATGGCCG ACAATACGCT CCAGTTTCGC TGGATTGTCA TGCTCCAGGG CAACCTGGCG GCGCTGTTCG CCGACCGTCC CGATGTCTTC GTGGCTGGCG ATCTCCTCTG GTACCCCGTC GAAGGGCGGC CCGACATCCG CCGCGCCCCC GACGTGCTGG TCGCCATCGG ACGCCCCAAG GGCGACCGCG GCGCCTATTT GCAGTGGGAA GAGGGGAATC AGCCGCCCCA GGCGGTGTTC GAGGTCCTCT CGCCCGGCAA TACGCTGCGC GAAATGGCGC GCAAGTTCGA GTTCTACAAC CGCTACGGCG TGCAGGAGTA TTACCTGATC GACCCCGAAC GCGGCGATGT GAGCGGCTGG GTGCGGCAGG ACGGCGCCTT GACGGTCATC GACGACATCG ACGGCTGGGT CAGCCCGCTG CTGGGGGTGC GCTTCGCCGT GCGGGATGGC GCCATCCAGT TGTTCTACCC GGACGGACGA CCGTTTCTGA CTTTTGAGGA ACTGGCGCAG GCGCGCGCCG CCGCCGAGGA GCGTGCGCAC CAGGAAGCCG AGGCGCGCGC AGCCGAAGCG CGCGCGCGAG CAGAAGCGGA AGCGCGTGCG CGCGCCGCCG AGGAGCGCGC CGCGCGGCTG GCGGAGCGGC TGCGCGCGCT GGGGCTGAAC CCAGATGATA TTGCCTGA
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Protein sequence | MSATTMEQTR AIVYPESDGQ PMADNTLQFR WIVMLQGNLA ALFADRPDVF VAGDLLWYPV EGRPDIRRAP DVLVAIGRPK GDRGAYLQWE EGNQPPQAVF EVLSPGNTLR EMARKFEFYN RYGVQEYYLI DPERGDVSGW VRQDGALTVI DDIDGWVSPL LGVRFAVRDG AIQLFYPDGR PFLTFEELAQ ARAAAEERAH QEAEARAAEA RARAEAEARA RAAEERAARL AERLRALGLN PDDIA
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