Gene Rcas_3375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3375 
Symbol 
ID5540874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4403707 
End bp4404444 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content68% 
IMG OID640895493 
Producthypothetical protein 
Protein accessionYP_001433443 
Protein GI156743314 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA CAACGATGGA GCAGACGCGC GCCATCGTGT ATCCCGAAAG TGATGGTCAG 
CCGATGGCCG ACAATACGCT CCAGTTTCGC TGGATTGTCA TGCTCCAGGG CAACCTGGCG
GCGCTGTTCG CCGACCGTCC CGATGTCTTC GTGGCTGGCG ATCTCCTCTG GTACCCCGTC
GAAGGGCGGC CCGACATCCG CCGCGCCCCC GACGTGCTGG TCGCCATCGG ACGCCCCAAG
GGCGACCGCG GCGCCTATTT GCAGTGGGAA GAGGGGAATC AGCCGCCCCA GGCGGTGTTC
GAGGTCCTCT CGCCCGGCAA TACGCTGCGC GAAATGGCGC GCAAGTTCGA GTTCTACAAC
CGCTACGGCG TGCAGGAGTA TTACCTGATC GACCCCGAAC GCGGCGATGT GAGCGGCTGG
GTGCGGCAGG ACGGCGCCTT GACGGTCATC GACGACATCG ACGGCTGGGT CAGCCCGCTG
CTGGGGGTGC GCTTCGCCGT GCGGGATGGC GCCATCCAGT TGTTCTACCC GGACGGACGA
CCGTTTCTGA CTTTTGAGGA ACTGGCGCAG GCGCGCGCCG CCGCCGAGGA GCGTGCGCAC
CAGGAAGCCG AGGCGCGCGC AGCCGAAGCG CGCGCGCGAG CAGAAGCGGA AGCGCGTGCG
CGCGCCGCCG AGGAGCGCGC CGCGCGGCTG GCGGAGCGGC TGCGCGCGCT GGGGCTGAAC
CCAGATGATA TTGCCTGA
 
Protein sequence
MSATTMEQTR AIVYPESDGQ PMADNTLQFR WIVMLQGNLA ALFADRPDVF VAGDLLWYPV 
EGRPDIRRAP DVLVAIGRPK GDRGAYLQWE EGNQPPQAVF EVLSPGNTLR EMARKFEFYN
RYGVQEYYLI DPERGDVSGW VRQDGALTVI DDIDGWVSPL LGVRFAVRDG AIQLFYPDGR
PFLTFEELAQ ARAAAEERAH QEAEARAAEA RARAEAEARA RAAEERAARL AERLRALGLN
PDDIA