Gene Rcas_3373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3373 
Symbol 
ID5540872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4402109 
End bp4402846 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content68% 
IMG OID640895491 
Producthypothetical protein 
Protein accessionYP_001433441 
Protein GI156743312 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA CAACGATGGA GCACACGCGC GCCATCGTGT ATCCTGAAAG CGATGGTCAG 
CCGATGGCCG ACAATACGCT CCAGTTTCGC TGGATTGTCA TGCTCCAGGG CAACCTGGCG
GCGCTGTTCG CCGACCGTCC CGATGTCTTC GTGGCTGGCG ATCTCCTCTG GTACCCCGTC
GAAGGGCGAC CCGACATCCG CCGCGCTCCC GACGTGCTGG TCGCCATCGG ACGCCCCAAG
GGCGACCGCG GCGCCTATTT GCAGTGGGAA GAGGGGAATC AGCCGCCCCA GGCGGTGTTC
GAGGTCCTCT CGCCCGGCAA TACGCTGCGC GAAATGGCGC GCAAGTTCGA GTTCTACAAC
CGCTACGGCG TGCAGGAGTA TTACCTGATC GACCCCGAAC GCGGCGATGT GAGCGGCTGG
GTGCGGCAGG ACGGCGTCTT GACGGTCATC GACGACATCG ACGGCTGGGT CAGCCCGCTG
CTGGGGGTGC GCTTCGCCGT GCGGGATGGC GCCATCCGGT TGTTCTACCC GGACGGACGA
CCGTTTCTGA CCTTTGAGGA ACTGGCGCAG GCGCGCGCCG CCGAAGCACG CGCGCGAGCA
GAAGCGGAAG CGCGTGCGCG CGCAGCCGAG GAGCGTGCGC AACGGGAAGC CGAGGCGCGC
GCCGCCGCCG AGGAGCGCGC CGCGCGGCTG GCGGAGCGGC TGCGCGCGCT CGGAATTGAC
CCGAACGGTG CGGCTTAG
 
Protein sequence
MSATTMEHTR AIVYPESDGQ PMADNTLQFR WIVMLQGNLA ALFADRPDVF VAGDLLWYPV 
EGRPDIRRAP DVLVAIGRPK GDRGAYLQWE EGNQPPQAVF EVLSPGNTLR EMARKFEFYN
RYGVQEYYLI DPERGDVSGW VRQDGVLTVI DDIDGWVSPL LGVRFAVRDG AIRLFYPDGR
PFLTFEELAQ ARAAEARARA EAEARARAAE ERAQREAEAR AAAEERAARL AERLRALGID
PNGAA