Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3372 |
Symbol | |
ID | 5540871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4401289 |
End bp | 4402068 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640895490 |
Product | hypothetical protein |
Protein accession | YP_001433440 |
Protein GI | 156743311 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGTGG CAACGACCGA AACACCGCGC GCCATCGTGT ATCCCGAAAG TGATGGTCAG CCGATGGCCG ACAATACGCT CCAGTTTCGC TGGATTGTCA TGCTCCAGGG CAACCTGGCG GCGCTGTTCG CCGACCGTCC CGATGTCTTC GTGGCTGGCG ATCTCCTCTG GTACCCCGTC GAAGGGCGGC CCGACATCCG CCGCGCTCCC GACGTGCTGG TCGCCATCGG ACGCCCCAAG GGCGACCGCG GCGCCTATTT GCAGTGGGAA GAGGGGAATC AGCCGCCCCA GGCGGTGTTC GAGGTCCTCT CGCCCGGCAA TACGCTGCGC GAAATGGCGC GCAAGTTCGA GTTCTACAAC CGCTACGGCG TGCAGGAGTA TTACCTGATC GACCCCGAAC GCGGCGATGT GAGCGGCTGG GTGCGGCAGG ACGGCGTCTT GACGGTCATC GACGACATCG ACGGCTGGGT CAGCCCGCTG CTGGGGGTGC GCTTCACCGT GCGGGATGGC GCCATCCAGT TGTTCTACCC GGACGGACGA CCGTTTCTGA CCTTTGAGGA ACTGGCGCAG GCGCGCGCTG CCGAAGCGCG CGCGCGAGCA GAAGCGGAAG CGCGTGCGCG CGCCGCCGAG GAGCGCGCGC ACCAGGAAGC CGAGGCGCGC GCCGCCGCCG AGGAGCGCGC ACAACGGGAA GCCGCTGCGC GCGCCGCCGC CGAGGAGCGC GCCGCGCGGC TGGCGGAGCG GCTGCGCGCG CTCGGAATTG ACCCGAACGG TGCGGCTTAG
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Protein sequence | MSVATTETPR AIVYPESDGQ PMADNTLQFR WIVMLQGNLA ALFADRPDVF VAGDLLWYPV EGRPDIRRAP DVLVAIGRPK GDRGAYLQWE EGNQPPQAVF EVLSPGNTLR EMARKFEFYN RYGVQEYYLI DPERGDVSGW VRQDGVLTVI DDIDGWVSPL LGVRFTVRDG AIQLFYPDGR PFLTFEELAQ ARAAEARARA EAEARARAAE ERAHQEAEAR AAAEERAQRE AAARAAAEER AARLAERLRA LGIDPNGAA
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