Gene Rcas_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3372 
Symbol 
ID5540871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4401289 
End bp4402068 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content69% 
IMG OID640895490 
Producthypothetical protein 
Protein accessionYP_001433440 
Protein GI156743311 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGG CAACGACCGA AACACCGCGC GCCATCGTGT ATCCCGAAAG TGATGGTCAG 
CCGATGGCCG ACAATACGCT CCAGTTTCGC TGGATTGTCA TGCTCCAGGG CAACCTGGCG
GCGCTGTTCG CCGACCGTCC CGATGTCTTC GTGGCTGGCG ATCTCCTCTG GTACCCCGTC
GAAGGGCGGC CCGACATCCG CCGCGCTCCC GACGTGCTGG TCGCCATCGG ACGCCCCAAG
GGCGACCGCG GCGCCTATTT GCAGTGGGAA GAGGGGAATC AGCCGCCCCA GGCGGTGTTC
GAGGTCCTCT CGCCCGGCAA TACGCTGCGC GAAATGGCGC GCAAGTTCGA GTTCTACAAC
CGCTACGGCG TGCAGGAGTA TTACCTGATC GACCCCGAAC GCGGCGATGT GAGCGGCTGG
GTGCGGCAGG ACGGCGTCTT GACGGTCATC GACGACATCG ACGGCTGGGT CAGCCCGCTG
CTGGGGGTGC GCTTCACCGT GCGGGATGGC GCCATCCAGT TGTTCTACCC GGACGGACGA
CCGTTTCTGA CCTTTGAGGA ACTGGCGCAG GCGCGCGCTG CCGAAGCGCG CGCGCGAGCA
GAAGCGGAAG CGCGTGCGCG CGCCGCCGAG GAGCGCGCGC ACCAGGAAGC CGAGGCGCGC
GCCGCCGCCG AGGAGCGCGC ACAACGGGAA GCCGCTGCGC GCGCCGCCGC CGAGGAGCGC
GCCGCGCGGC TGGCGGAGCG GCTGCGCGCG CTCGGAATTG ACCCGAACGG TGCGGCTTAG
 
Protein sequence
MSVATTETPR AIVYPESDGQ PMADNTLQFR WIVMLQGNLA ALFADRPDVF VAGDLLWYPV 
EGRPDIRRAP DVLVAIGRPK GDRGAYLQWE EGNQPPQAVF EVLSPGNTLR EMARKFEFYN
RYGVQEYYLI DPERGDVSGW VRQDGVLTVI DDIDGWVSPL LGVRFTVRDG AIQLFYPDGR
PFLTFEELAQ ARAAEARARA EAEARARAAE ERAHQEAEAR AAAEERAQRE AAARAAAEER
AARLAERLRA LGIDPNGAA