Gene Rcas_3366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3366 
Symbol 
ID5540865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4396603 
End bp4397202 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content60% 
IMG OID640895484 
Productnicotinate (nicotinamide) nucleotide adenylyltransferase 
Protein accessionYP_001433434 
Protein GI156743305 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1057] Nicotinic acid mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.625074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGTG GGCGCACCGG TATTCTTGGC GGCTCGTTTG ATCCGATCCA CTACGGGCAC 
CTGGCGATTG CCGAGGAGGT GCGCGTTCTC CTTCGGTTGA ACCGTGTGTT GATCATTCCT
GCGCGGGAGC AGCCGCTGAA GCCGGGTGGG AGTGTGGCAT CGCCGGCGCA TCGCCTCGCC
ATGGCGCGCC TGGCATGCGC CGATAATCCA TTCTTTGAAG TCTCTCGCAT CGAGATCGAT
CGCCCCGATC CGTCGTATAC ATCTGTTACT CTGCAACTCC TCCACGAACA GGGACTCAAT
GATCTCTATC TGATTCTTGG GATAGACTCA GTGGCGGACC TGCCACGCTG GCGCGAGGTT
CGACGCATCC TGGAGCTGGC GCATATCGTC GGTGTTGCTC GCCCCGGTGC TGCGGTCGAT
CTGTCGCACC TGTCACAGGT TCTTCCACAG TTGCCAGCAC GCCTGATTGA GATCGATGGC
CCGCGCCTCG ATATTTCCAG CACCGATCTA CGCCAGCGTG TCGCGCAGGG TAGACCCATC
CGTTACCAGA CGCCGGACGC CGTGGTTGCC TATATTGAGG CGAATGGATT GTACCGGTGA
 
Protein sequence
MTSGRTGILG GSFDPIHYGH LAIAEEVRVL LRLNRVLIIP AREQPLKPGG SVASPAHRLA 
MARLACADNP FFEVSRIEID RPDPSYTSVT LQLLHEQGLN DLYLILGIDS VADLPRWREV
RRILELAHIV GVARPGAAVD LSHLSQVLPQ LPARLIEIDG PRLDISSTDL RQRVAQGRPI
RYQTPDAVVA YIEANGLYR