| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3365 |
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| Symbol | gidB |
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| ID | 5540864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4395875 |
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| End bp | 4396579 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895483 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_001433433 |
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| Protein GI | 156743304 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.653683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGAAC TCTTGCGGAT TGCGACATCC TGGGGTTTGC GCCTCGATCA GCGCCAGATC
GAACAATTCG CGCGCTATAG CGCCGAACTC CGCGCCTGGA ATATGCGCGT CAATCTGACA
TCGATCACCG ACGAGCGCGA GATTGTCACC CGCCATTTCC TCGACTCGCT GCGCTGCGCG
CTGAGTTGGG GCGATACGCC GTCTCGCCTG ATAGATATCG GTAGCGGGGC GGGGTTTCCG
GGGTTGCCGC TGAAGATACT GCACCCCGAA TTGCACGTCA CCCTTGTGGA AAGCGTCGGC
AAGAAAGCCG CATTCCTTCA GCATATCGTG GCTGTGCTCG ATCTGCGGGA TGTGACCGTG
GTGACCGCTC GCGCCGAGGT TGTGGGACGC GACCCACAGC ACCGCGAACA GTACGATGTC
GTCACTGCGC GCGCCGTGGC GGAACTGGCG ACACTCGTGG AATACGGTCT GCCGCTCTGT
CGCATTGGCG GACGGTTTCT GGCGCCAAAG GGAAGCGCCA TCGATGACGA GGTTGTACGC
GCGCGCATCG CTATTGCCCG GCTTGGCGGT CAGGTGATCG GCGTCGAGCC GGTGGAGATA
CCCGGTGTCG AACTGCGGAC GCTGGTGGTC ATTGTCAAAG TCGCCCCTAC GCCTGCCGCC
TACCCGCGTG CCGTTGGCAT TCCTGCGAAA CGACCTATTC TATGA
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| Protein sequence | MDELLRIATS WGLRLDQRQI EQFARYSAEL RAWNMRVNLT SITDEREIVT RHFLDSLRCA
LSWGDTPSRL IDIGSGAGFP GLPLKILHPE LHVTLVESVG KKAAFLQHIV AVLDLRDVTV
VTARAEVVGR DPQHREQYDV VTARAVAELA TLVEYGLPLC RIGGRFLAPK GSAIDDEVVR
ARIAIARLGG QVIGVEPVEI PGVELRTLVV IVKVAPTPAA YPRAVGIPAK RPIL
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