Gene Rcas_3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3364 
Symbol 
ID5540863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4393749 
End bp4395866 
Gene Length2118 bp 
Protein Length705 aa 
Translation table11 
GC content63% 
IMG OID640895482 
ProductADP-ribosylation/crystallin J1 
Protein accessionYP_001433432 
Protein GI156743303 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1397] ADP-ribosylglycohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0478081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTCC CTGCCGATTA TGTTGAGCGT GTCTATGCTG GTGTGCTGGG GAAGATCATT 
GGCGTCTATC TGGGGCGTCC GTTCGAGGGT TGGACGTATG ACCGGATAAT GGCGGAGTTG
GGGGAGGTCT GGTACTATGT TCATGAGCAG TGTGGTGTGC CGTTGGTTGT GACCGATGAT
GATCTTTCCG GCACGTTTAC GTTCCTGCGG GCGCTGCCGG ACTATGGAAA CACGCGCGAA
CTTTCCCCAA CGCAGATCGG AGAGACCTGG CTGAACTATA TTATCGAGAA CCGCGCCATT
CTCTGGTGGG GTGGCATGGG GCGCTCGACG GAACATACCG CGTTTCTCCG TTTGAAGCAT
GGGATTGCTG CGCCCCACAG CGGATCGGCG GCGCTGAATG GGCGGGTGAT CGCCGAACAG
ATTGGGGCGC AGATTTTCAT CGACGGTTGG GCGATGGTTG CACCCGGCGA CCCGGAACTG
GCTGCCGATC TGGCGCGGCG CGCCGCGTCG GTCAGTCACG ACGGCGAGGC GATCTACGGT
GCGCAGGTGA TTGCAGCAAT GGAGTCGCTG GCGTTCGTCG AGCGCGATCT GCACGTCCTG
ATCGATACCG CTGTCAGGTT CATTCCACAC GACTCGATCA TCTTTCGCCT GATCGCCAAC
CTGCGCGAGT GGCGCGCTCG CTTCCCGGAC TGGCGCGTCG CGCGTGAGCA GATTGCGGCG
CAGTATGGCT ATGATCGCTA TCCCGGCAAT TGTCATATCG TCCCCAATCA CGCGCTGATC
ATGCTGGGGT TGCTCTATGG CGAGGATGAC TTCCAGAAAT CGCTCATGAT CACTGCGACT
GCCGGGTGGG ATACCGACTG TAACGCGGGG AATGTCGGCT GCCTGCTGGG GATCAAGAAC
GGTTTGGCCG GCATCGACGC CGGTCCCGAC TGGCGCGGTC CGATTGCAGA TCGGCTATAC
CTGCCGACTG CCGATGGCGG TCGAGCCGTC ACCGACGCGG TGCGCGAGAC GTTTGCCGTG
GTCAATATCG GCAGGGATCT GGCAGGCGAG ACCCCGCTTG CGCCCAAGCA TGGCGCACGC
TTCCACTTTG CGTTGCCGGG GAGCGTCCAG GGTTTCATCG TTGACGACAG CGCCGACTCC
AGAGAAACGC TTTCGCTCGA AAACGTCACC GGGCAGAGCG TCTGCGGGGA TCGGTGTCTG
GCGTTGCGTT ATCGCCATCT GGCGTTAGGG CGCGCGGCGC GCGCGGCGAC GGCGACGTTT
CTGTTGCCCG AAACACTGCG TATGCCTGGC TATGCCATGC TTGCCTCCCC AACTCTCTAC
CCTGGACAGA ACCTCAGCGC GCGCGTATGC GCTGATCGAT CAAATCCCAC GCCGGTACAG
TGCCGCCTTT ACCTGCTGGT GTACGACTCC TGCGATGCCA TCGTTCGGAA GTATGGCGAC
GCGACGACAT TGGCGCCGGG ATCGGAACAC GTCTTTGCCT GGCGCGTGCC GGATACCGGC
GGTCAACCGA TCGCAGCGGT CGGCGTCGAA CTGCGCGGAC GCGGGCACGG AACAGTGTAC
CTCGATTATC TGACCTGGGA AGGCACGCCA GAAGCGACCT TCGGTAGACC GGCAGGCGGC
AGTATGTGGC GGCGCGCCTG GGTGAACGGA GTCAGCGCAT ATGAGCAAGG GGCGAACGAA
CCCTATCGCC TGATCCAGAA CGAGGGCACA GGACTGCTGA TCCAGGGAAC GCGCGAGTGG
CGCGACTACC GTGTGTGCGC CGTCGTGACG CCGCACCTGG CGGAAGCGTT TGGCTTGGGA
GCGCGCGTGC AGGGTATGCG CCGCTACTAT GCGCTTCTGC TGACACGCAC AGCGCAGCGC
AACAGCGTGG TGCAGTTGGT GCGAGTATGC CACAGCGCGA CGTTGCTTGC CGAAGCGTCC
TTCGCCTGGG CATACGAGCA GCCATACATC TTCGACCTCT GCGTAGTTGG GCGCGATCTG
ATCGGCGTCG TCTATGCGCC CGATGGCGCC AGCGCCACCA TTGCTGCCCA GGACGATCTG
CTGGACGGCG GCGGCATTGC CCTGGTGCTG ACCGAAGGGC ATCTCAGCGC CGATCAGGTC
ACAGTGCGCG TCGGGTAA
 
Protein sequence
MPLPADYVER VYAGVLGKII GVYLGRPFEG WTYDRIMAEL GEVWYYVHEQ CGVPLVVTDD 
DLSGTFTFLR ALPDYGNTRE LSPTQIGETW LNYIIENRAI LWWGGMGRST EHTAFLRLKH
GIAAPHSGSA ALNGRVIAEQ IGAQIFIDGW AMVAPGDPEL AADLARRAAS VSHDGEAIYG
AQVIAAMESL AFVERDLHVL IDTAVRFIPH DSIIFRLIAN LREWRARFPD WRVAREQIAA
QYGYDRYPGN CHIVPNHALI MLGLLYGEDD FQKSLMITAT AGWDTDCNAG NVGCLLGIKN
GLAGIDAGPD WRGPIADRLY LPTADGGRAV TDAVRETFAV VNIGRDLAGE TPLAPKHGAR
FHFALPGSVQ GFIVDDSADS RETLSLENVT GQSVCGDRCL ALRYRHLALG RAARAATATF
LLPETLRMPG YAMLASPTLY PGQNLSARVC ADRSNPTPVQ CRLYLLVYDS CDAIVRKYGD
ATTLAPGSEH VFAWRVPDTG GQPIAAVGVE LRGRGHGTVY LDYLTWEGTP EATFGRPAGG
SMWRRAWVNG VSAYEQGANE PYRLIQNEGT GLLIQGTREW RDYRVCAVVT PHLAEAFGLG
ARVQGMRRYY ALLLTRTAQR NSVVQLVRVC HSATLLAEAS FAWAYEQPYI FDLCVVGRDL
IGVVYAPDGA SATIAAQDDL LDGGGIALVL TEGHLSADQV TVRVG