| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3362 |
|---|
| Symbol | |
|---|
| ID | 5540861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 4391237 |
|---|
| End bp | 4392247 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640895480 |
|---|
| Product | N-acetyl-gamma-glutamyl-phosphate reductase |
|---|
| Protein accession | YP_001433430 |
|---|
| Protein GI | 156743301 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0002] Acetylglutamate semialdehyde dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01850] N-acetyl-gamma-glutamyl-phosphate reductase, common form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0453282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCG TCGGTATTTT TGGCGCAACC GGTTATGCCG GGTATGAACT GCTCCGCTGG
CTGCGGCGTC ACCCGGAAGT GCGCGTCGTC TTCGCCGCTT CCGAGTCGTC GGCTGGAGCA
TCGCTCGCCG ATGTCATTCC CGGTCCGCTC GATACACCAC TGATTGCGCC CGACGAAGCG
CCGCTCGGCG ATGTCGATCT GGTCTTTCTG GCGTTGCCGC ACGGCGCTGC GGGAAAGATG
GCGCGGCGCG CACGCGCGGC TGGCGTGCGT GTGATCGATT TCTCCGCCGA TTTTCGACTG
GCCACGCCCG AATCTTACCG GCGCTGGTAT GGGCACGATC ATCCCGCGCC CGAATTGCTG
CCGGCGCCCT ACGGTTTGCC GGAACTCAAC CGCGCGGCGC TGCGCGGCGC GATGCTGATC
GCTAATCCTG GCTGTTATCC GACCGGTATG CTGCTCGGTG TTGCGCCGCT TCTCATGGCC
GGCGCGTTGA CCGACCCGCT GATCATCGTC GATGCCAAGT CGGGAGTGTC GGGGGCAGGG
CGCGCGCCGA AGCAGAATAC GCACTTCGTC GAAGTGAACG AGAATCTTGC GCCGTACAGT
ATCGGGCAGG TTCACCGTCA TGTTGGCGAG ATGCGCCAGG AAGCGCAGCG GATCGCGCGC
GGCGTGGCGC CGGAGATCGT GTTCACGCCG CAGTTGCTGC CGGTGAGCCG CGGTATCCTG
AGCACGATCT ACCTGCGCAT ACCGGACGAC TGGAGTGAGG ATCGGGTGCG CGCGCTGTAC
CGTGAGCAGT ATGCTGACGA ACCATTCGTG CGGGTGCTGT CGGCGGGCGC GCTGGCGACT
CTGGGGCACA CAACAGACAC GAATGTCTGC GCTATCTCGC TGACCCTGGC GCGACCGGGG
TTGCTCATCG TTGTCTCCAG TGAAGACAAT ATGGTCAAAG GCGCTGCTGG TCAGGCGATC
CAGAACATGA ACCTGATGTT TGGGCTGGAT GAGACAACCG GATTGGTGTA G
|
|---|
| Protein sequence | MIRVGIFGAT GYAGYELLRW LRRHPEVRVV FAASESSAGA SLADVIPGPL DTPLIAPDEA
PLGDVDLVFL ALPHGAAGKM ARRARAAGVR VIDFSADFRL ATPESYRRWY GHDHPAPELL
PAPYGLPELN RAALRGAMLI ANPGCYPTGM LLGVAPLLMA GALTDPLIIV DAKSGVSGAG
RAPKQNTHFV EVNENLAPYS IGQVHRHVGE MRQEAQRIAR GVAPEIVFTP QLLPVSRGIL
STIYLRIPDD WSEDRVRALY REQYADEPFV RVLSAGALAT LGHTTDTNVC AISLTLARPG
LLIVVSSEDN MVKGAAGQAI QNMNLMFGLD ETTGLV
|
|---|
| |