Gene Rcas_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3360 
Symbol 
ID5540859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4388925 
End bp4389440 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content60% 
IMG OID640895478 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001433428 
Protein GI156743299 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.277011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTAC ACGTCCGCGA GTCGCAGGTT TTTGTCGTGC CGCCGCGCGC GCCGGACATC 
ATCGTGCGCC GCGCCGAAGA GGACGATGTC GAATCGATTG TCGCCATTGT CGCCGAAAAT
GCTCGTCAGG GTCATCTGCT GCCGCGTAGC GCCGACAATA TCCGCGCCAC GTTGTCGTCG
TGGCTGGTCG CGGAAGTGGA CGGCAGCGTT GCAGGCATTG GCTCGCTCGT TCAGATGAGC
CCGACGCTGG TCGAAGTGCG TTCGCTGGCG GTTTTACCCG AGTATCGCGG GCTGCGCGTC
GGGCAGGCGA TTGTGCGCGG ATTGGTGGAC GAAGCGCGTC GTCGTGGGTT TCCGACGGTG
TTCGCACTGA CGCGTGCTGT TCCCTTCTTT GAGAAACTGG GTTTTCGCGT TACCGCAAAA
GAGGATTTTC CTGAGAAGGT CTGGCGCGAT TGTGTTATGT GTCCGCTCCA GCATGCGTGT
GATGAGACGG CAGTTGTAAT CGAGTTCGAG CGGTAG
 
Protein sequence
MTVHVRESQV FVVPPRAPDI IVRRAEEDDV ESIVAIVAEN ARQGHLLPRS ADNIRATLSS 
WLVAEVDGSV AGIGSLVQMS PTLVEVRSLA VLPEYRGLRV GQAIVRGLVD EARRRGFPTV
FALTRAVPFF EKLGFRVTAK EDFPEKVWRD CVMCPLQHAC DETAVVIEFE R