| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3347 |
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| Symbol | |
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| ID | 5540846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4367337 |
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| End bp | 4369226 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895465 |
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| Product | peptidoglycan binding domain-containing protein |
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| Protein accession | YP_001433415 |
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| Protein GI | 156743286 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3409] Putative peptidoglycan-binding domain-containing protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATGA AGAAGCCGCT ATCTGCCCGG TCTTCTGAAC CGGCAGATGG GATCGCAACC
GTCTGGATCA ACCAGTTGCG GCAAGGGCCA GCTCCACCCG CAATTGCTGA GGAGGCGCCG
GTCACGCCAG AGCAGCAGCG AGACGGTGAT CGGGCATTCG GGCATCACTT CGGCGACTTT
CGCCTCCACT CCGGCGCAGA GACAGGACTG ACGCCTGCGG CCCCGCCAGT CGCACCGTTG
ACTGCGTTTC ACCGTATCAC CATTCAGACC CAACGCTCTC CCCAATCATC GCGTCCTACC
CTTCGCCAGG GATCGTCCCA TGCGGAGGAC ATCACATTCC TTCAGGAACG ATTGAACAGT
GATGGCGCCA CGCCAGCGCT CGAGGTCGAT GGCATCTTCG GTCCGCTCAC CGATGCCGCG
ACGCGCGAGT TTCAGCGTCG CCACGGACTG ATCGTCGATG GCATCGTTGG CCCACAGACA
TGGGGCGCTC TCAATGCCCT CGAGCGGGCA GGCATTGCTG GACCGGAAGA TGTGATGAGT
GGAACACGTC CGGTGACCGC TGAACAACAC CTCGAGGTCG AGCAGGCGCT GCATCCGAAT
GCGCAAACCT CCGGCGGCTC AGTCACCACG CCGCCGATGA CTGGCGCAGG GGTTGGCGGC
GAGTTTGAAC AGCACATGAT CGCGGCGCTC GATACGCTGA TCAACGATCG AGTGAACCCC
GAAAACGAAA TGCCCGCTTC GCCAGACCTG ATGGACCCGA TTCGTGAGAT CGCCGATGCA
GCGCAGCAGA CGGTGGAAGA TTTCTACGCT CGCTATATTG TGATGGCCAG CCGCACTCCA
ACCGGTTCGT ACCATCCCGG CAGCTTTCGC ATCCCTCTCG GCGATGCGTC CACGCGCCCC
GTCTCGCGGG AATATGCTGC CGGCTGGGTC GACTATTTTA TGTCCGAGCC ATCCTATGAG
CCAAGCCAGG TGCTGACCGA TCACAACGTC GATACATCGC GCGACCGCCC GGATCGCGCC
GAGTATACCC GTGTGCGCGA TCTCTATGTC AGTAATGATA CACGGTTCCA TAACGTGCGC
AATGTGATTC GCGGCTGTCC CGCCGAAGCC GGAACGGGAA CCGTGTTTGT TCAGCCGCGT
GAGTATCAGG GGCTGGTTGG CAGGTGGGCG CTCTTCAAAA CCATGATGCA CGAGTTTCTG
CATCTGGTGA CCCATCCGAA TTATAGTCGC GCTGCGGCAG CGGTTGGCGG CAGTGCGCGT
CAGGCGCTGA TCGAAGGATT TACCGACCAC TTTACGCTCC AGGTATGGCA TCACGTGCGC
GACTCACTGG AGGCGAATCG CGCACTCCGC CAGCGTGTTG AGGGAAATCT GTTCCAACCC
GATCTGGATC CCACCATCCT TGAAGATCCA TCAACATATT CTCAGGAAGC GCCGGAACGC
ATCGTTGCGG CTGTTGGCGA GGAAAATGCC CGGGTGGCTT ATTTTATGGG ACATGCCGAT
CTGCTCGGGC TGGGTGCAGG CACACTGAGC GAGGCGCCGT TGACGGGCAT TGCAACCTGG
GAACCAACCG ATAGCAACAC CGCAGAAGAG TACACGGTCC GCGCCGGCGG CGAGACAGTC
GCCCAAATTC GTGAGCGCAC CAATGCAGCG ACCATCACGG AACTCGATGG CACTGAGGTG
GTCGATGACA CGCAGCGTTT TGCCGCCGGT CATCGCCTGC ACATTCCAGG CATTCGCTGG
TATCGCGCGA TCGCCGAAGA TACGCGGGCG CAGGTCGCCG GGCAGCATGG CATAACGCTT
GATCAACTCG AACGGGCAAA CGGCTGGACG CACCGCCGCG GCAATACGCC GATCCCGGCG
GGGACGCGAG TGCTGATTCC GCGACACTAG
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| Protein sequence | MRMKKPLSAR SSEPADGIAT VWINQLRQGP APPAIAEEAP VTPEQQRDGD RAFGHHFGDF
RLHSGAETGL TPAAPPVAPL TAFHRITIQT QRSPQSSRPT LRQGSSHAED ITFLQERLNS
DGATPALEVD GIFGPLTDAA TREFQRRHGL IVDGIVGPQT WGALNALERA GIAGPEDVMS
GTRPVTAEQH LEVEQALHPN AQTSGGSVTT PPMTGAGVGG EFEQHMIAAL DTLINDRVNP
ENEMPASPDL MDPIREIADA AQQTVEDFYA RYIVMASRTP TGSYHPGSFR IPLGDASTRP
VSREYAAGWV DYFMSEPSYE PSQVLTDHNV DTSRDRPDRA EYTRVRDLYV SNDTRFHNVR
NVIRGCPAEA GTGTVFVQPR EYQGLVGRWA LFKTMMHEFL HLVTHPNYSR AAAAVGGSAR
QALIEGFTDH FTLQVWHHVR DSLEANRALR QRVEGNLFQP DLDPTILEDP STYSQEAPER
IVAAVGEENA RVAYFMGHAD LLGLGAGTLS EAPLTGIATW EPTDSNTAEE YTVRAGGETV
AQIRERTNAA TITELDGTEV VDDTQRFAAG HRLHIPGIRW YRAIAEDTRA QVAGQHGITL
DQLERANGWT HRRGNTPIPA GTRVLIPRH
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