| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3335 |
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| Symbol | |
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| ID | 5540833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4351226 |
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| End bp | 4352764 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640895452 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001433403 |
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| Protein GI | 156743274 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.277543 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAATC TCGCCATTAT TCTGGAGGAG AGCGCGCGCC GGATGCCCGG AAAGACTGCT
GTCATCCTCG ACAGCATTCG CCTGAACTAT GCCGAACTAA ACGGCGCCGC CAACAAAATT
GCCAACGGTC TGGCAAATCT CGGCGTGCGC CCTGGCGACA AAGTGGCGAT GATGATCCCC
AACACGCCAC ACTTCCCGAT GTGCTATTTC GGCATTCTCA AGGCTGGCGC GACGGTTGTG
CCGCTCAATG TGCTATTCAA GCGCGATGAG GTTCGGTATC ATCTGGAAGA CAGCGACTCG
GTCGCACTGA TCGTCTGGGA AGGATTCCTC GATGAAGCCG CGTCCGGCTT TCACGCGGTC
AAAACCTGCC GTCACCTGAT CGTCGCGCAG GCGCCGGGTT CCACGGCGAC ACTCCCCGAT
GGCGCGATTC CGCTCGGCAG TCTCCTCGCC GAACACGCTC CGGTATTCGA TACGGTCCAG
ACCATGCCGG ACGATACGGC GGTTATTCTC TACACCAGCG GCACGACGGG TCGCCCCAAG
GGCGCGGAAC TGACCCATGC CAACATGTTC TTGAATGCCA CGATCTGCAC CGATAAGTTG
CTGAATGTCT CGTCAGAAAC GGTGGGGCTG GCGGTACTGC CATTGTTTCA CAGTTTTGGA
CAGACGTGTG TGATGAACAG TCTGATCTAC GCCGGCGGCG CCATCACCAT GCTGCCGCGC
TTCGAACCGC AGAAGGCGCT CGAAGTGATG GCGCGCGACC GGGTGACGTA TTTCGCCGGC
GTGCCGACGA TGTATTTCTA TCTGCTCAAT TTCCCCGGCG CAGATCAGTA TGATCTGTCG
GCGCTTAAGT TCTGCGTCTC AGGCGGCGCA GCGATGCCGG TCGAAGTGAT GCATGCCTTC
AACCGTAAAT ACAATGTCAC CATCCTCGAA GGGTACGGTC TCTCCGAAAC TTCTCCGGTG
GCGTCGTTCA ATCATCTCGA CCGCGAGCCA AAGCCGGGGT CGATCGGCGT GCCGATCTGG
GGCATTGAGA TGCGCGTGGT GGATGACCAG GGGCGCGAGG TTCCCAACGG CGAACTTGGT
GAGATTGTCA TTCGTGGGCA CAATGTGATG AAGGGGTACT ACAAGCGTCC CGACGCAACT
GCTGATGCGA TTCGCAATGG CTGGTTCCAC AGCGGCGACA TAGCCTATCG TGACGATGAC
GGTTTCTTCT TCATCAAGGA TCGCGTGAAG GATATGATCA TCCGCGGCGG GTTCAATGTC
TATCCGCGCG AGATCGAAGA GGTGCTCTAC GGGCATCCAG CCATCGCCGA AGCGGCCGTC
ATTGGCGTTC CCGATCAGGC GCTTGGCGAG GAGGTCAAGG CGGTTGTCGC CCTGAAGCCA
GGGCATACGG CAACCGAGAC AGAGATTATT GAGTACTGTA AGGAACGCCT GGCTGCCTAC
AAGTATCCGC GCATCGTCGA AATCCGCGAG ACGTTGCCCA AGACGGCGAC CGGCAAAATC
CTCAAGCGCG AATTGCGTCA GATCGAAGTG ACTGCATAG
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| Protein sequence | MLNLAIILEE SARRMPGKTA VILDSIRLNY AELNGAANKI ANGLANLGVR PGDKVAMMIP
NTPHFPMCYF GILKAGATVV PLNVLFKRDE VRYHLEDSDS VALIVWEGFL DEAASGFHAV
KTCRHLIVAQ APGSTATLPD GAIPLGSLLA EHAPVFDTVQ TMPDDTAVIL YTSGTTGRPK
GAELTHANMF LNATICTDKL LNVSSETVGL AVLPLFHSFG QTCVMNSLIY AGGAITMLPR
FEPQKALEVM ARDRVTYFAG VPTMYFYLLN FPGADQYDLS ALKFCVSGGA AMPVEVMHAF
NRKYNVTILE GYGLSETSPV ASFNHLDREP KPGSIGVPIW GIEMRVVDDQ GREVPNGELG
EIVIRGHNVM KGYYKRPDAT ADAIRNGWFH SGDIAYRDDD GFFFIKDRVK DMIIRGGFNV
YPREIEEVLY GHPAIAEAAV IGVPDQALGE EVKAVVALKP GHTATETEII EYCKERLAAY
KYPRIVEIRE TLPKTATGKI LKRELRQIEV TA
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