| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3329 |
|---|
| Symbol | |
|---|
| ID | 5540827 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 4345325 |
|---|
| End bp | 4346686 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640895446 |
|---|
| Product | peptidase M14 carboxypeptidase A |
|---|
| Protein accession | YP_001433397 |
|---|
| Protein GI | 156743268 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2866] Predicted carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGTGAAG GACGGTATAA CGTTCGACGT GCAACGTGCA ACGTGCAACG TTCGCTCCTC
TTGCTCCTGC TCATCTTTTT TGCTGCGCCA CTCCATGCCG CGCCGGTGCG CCAACCGACC
GTGGAGGACC TGACCCTCGG CACTTCGGCG CAGGGTCGCC CGATCACAGC GCTGCGCATC
GGCAATGGAC CGATCAAACT GGTGATCATC GGCAATACGC ATGGCGCGCC AGAAGCCAAT
ACGCATACGC TGGCAACCAT GCTTGCCGAC CATTTTCGCG CCAATCCGCA CGAGGTTCCG
CCTGCCGTAC GCCTCTACAT CATCCCCACC ATCAACCCCG ATGGATTGGC GCTCGGTACG
CGGTTCAACG CGCGCGGCGT CGATCTTAAT CGCAACATGA ACACCAATTT CGACGCATGT
CCCGACAACG ACTGGCGTGT GACCGTATTC GGCGCGTATG GCATCGTGTC CGACACCGGC
GGACCCTACC CCGACTCGGA GGTCGAGAGT CGCCTGGTGC GCAGTTTTCT GCTCGACGCC
TGGGGGGCGA TCTTCCTGCA CTCAGCGGCC GGCAACGTGT TTCCCGCGTT CTGTGACCAT
GCGCCATCCA TCGAGATGGC ACAAACCTAT GCCACCGCCA GCGGCTACCG CTACACCCGC
GTCTGGGAAC AGTACATCAT CACCGGCGGC ATGCACGATT GGGCAGCCAG TCTGGGGATC
GCGGCGATCA TTCCCGAACT GCTCACCGGA ACAGAGCCGG AGTTCGCACA AAACCTGGCA
GGAATTCAGG CGGTGCTGGC GGCCGCAGAA AAACTGCTCC CCGCGCCGGA AGATCACGTC
GAGCATGGCA TCGTCGTACC GGCAATCCTC TGGCGCTTCT GGAAGATGCA TGGCGGCGAC
GACCTGTTCG GTCCTCCGCT GATGCCGGCG GTCGTTGAGG AGGGCGTGAT ACGCCAGATA
TTCGAGCGCG CCGTGTTGGA GTTGCATCCC GAATGGGCAG ACACGCCGTA CCTGGTTCAG
GTGACGCCGC TTGGGCGCAC CTGCTCGCCG CCCGTTGGTG CAGCGCTACG CAATGATTGC
ACGCCTCCCG GATGCCGCCG TTTCACCGAA ACACCCTATG CGATCCGTGG CGCGTTCGCC
GCATACTGGG AACGTTACGG CGGGTTGCAC ACATTCGGCT TCCCACTGAG CGACGAAAAG
GTGGCATACG CCGCCAACGG TCAGCAGCGC GCGCAACAGG TCTTCGAGCG CGCCGTGTTG
ATCCTTAACG ACGATGGCAA CGTGTCGCTT GCCCCGCTCG GATGGGCATT CCTGGTGCGG
GAACGATCGC TTGCGCCGAC AGCGGCGCAT CAGGTGAGGT GA
|
|---|
| Protein sequence | MSEGRYNVRR ATCNVQRSLL LLLLIFFAAP LHAAPVRQPT VEDLTLGTSA QGRPITALRI
GNGPIKLVII GNTHGAPEAN THTLATMLAD HFRANPHEVP PAVRLYIIPT INPDGLALGT
RFNARGVDLN RNMNTNFDAC PDNDWRVTVF GAYGIVSDTG GPYPDSEVES RLVRSFLLDA
WGAIFLHSAA GNVFPAFCDH APSIEMAQTY ATASGYRYTR VWEQYIITGG MHDWAASLGI
AAIIPELLTG TEPEFAQNLA GIQAVLAAAE KLLPAPEDHV EHGIVVPAIL WRFWKMHGGD
DLFGPPLMPA VVEEGVIRQI FERAVLELHP EWADTPYLVQ VTPLGRTCSP PVGAALRNDC
TPPGCRRFTE TPYAIRGAFA AYWERYGGLH TFGFPLSDEK VAYAANGQQR AQQVFERAVL
ILNDDGNVSL APLGWAFLVR ERSLAPTAAH QVR
|
|---|
| |