| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3325 |
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| Symbol | |
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| ID | 5540823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4338358 |
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| End bp | 4339332 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895442 |
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| Product | protein-export membrane protein SecF |
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| Protein accession | YP_001433393 |
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| Protein GI | 156743264 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAC TTGTCAAACT GCGCTACTGG TGGTTCGCGC TGTCGATGCT CATTATCATC
CCTGGCCTTG TCTCGCTGGC GATTGTCGGG TTGCGCCTGG GAATCGACTT CAGCGGCGGG
GCGCTGTGGG ATTTGCAATT CGTCGAGCGC GCACCAGGTC AACTTGATAC TGAGCGTATT
CGATCTATCT TTGCGGCGCA GGGATTCGAG GGAGCGCTTG TGCAGTTGAC CGAGTCGCAG
GTCGATGGGC GCACCGTTGC CAGCGCTGTG GTGCGCACCC GTTCGCTGAG CGAGACCGAT
CCTGAGACGC AGCGGCAGCA GGTTCTCAGC GCGCTGAAGT CCGAATATGG ACAGGTCAAC
CAACAGGCGT TACAGACGGT CGGCGCTACG GTGAGCGCTG AATCGACCCG CAGCGCAGTG
ATTGCCGTGA TCGCAGCGTG TGTGGTGATT CTGATCTATC TGACCCTCGC CTTCCGCCGC
GCGCCCCATC CGGTGCGTTA TGGCGTTTGC GCGATCCTGG CGATGATCCA CGATGTGCTG
CTGGTGCTGG GAGTCGCCTC GATCCTTGGC GTTGTCATCG GGTTAGAAGT GGATGCGCTG
TTCCTGACTG CGCTCCTGAC GGTTATCAGT TTCTCGGTAC ACGATACGAT TGTGGTTTTC
GACCGCATTC GCGAGAACCT GATCAATCGG CGCCCCACCG AAACATTCGA TGATATTGTC
AATCACAGCA TTGTGCAGAC GCTGCCACGT TCGGTCAATA CCCAGTTGAC CACCTTCTTC
ACCCTGATGG CGCTGCTCCT TTTCGGCGGC GAGAGTATCC GCAATCTGGT GCTGATTCTG
CTGATCGGGC TGATCAGCGG CACCTACTCG TCGATCTTCA ACGCTGCGCA GTTGCTGGTG
GTGTGGGAAA ACCGCGAGTG GAACCGCTGG TTCCGCCGCA GCAACCCGCC GGGCGCCGAA
GCGCCTGCGG CGTAG
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| Protein sequence | MDKLVKLRYW WFALSMLIII PGLVSLAIVG LRLGIDFSGG ALWDLQFVER APGQLDTERI
RSIFAAQGFE GALVQLTESQ VDGRTVASAV VRTRSLSETD PETQRQQVLS ALKSEYGQVN
QQALQTVGAT VSAESTRSAV IAVIAACVVI LIYLTLAFRR APHPVRYGVC AILAMIHDVL
LVLGVASILG VVIGLEVDAL FLTALLTVIS FSVHDTIVVF DRIRENLINR RPTETFDDIV
NHSIVQTLPR SVNTQLTTFF TLMALLLFGG ESIRNLVLIL LIGLISGTYS SIFNAAQLLV
VWENREWNRW FRRSNPPGAE APAA
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