Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3319 |
Symbol | |
ID | 5540817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4333498 |
End bp | 4334787 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640895437 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_001433388 |
Protein GI | 156743259 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCATCGC GCCCCGGCAG ACGATCATCG GGCGTGGAAA AATTCATCGC CGTCCGCAAG CGGACGCGCA GCGCAGCATT TGCACTGCAC GAAGCGGCGA CCGCTGAAAA ACGCATGGAA ATCATGCGCG ACGCACAGAC ATCGCGCCGC GCACTGGAAC TCATCCGACT CGGGTTGCGT CCCCATCTGC CCGGACAGCG CAAGCCGGTC GGACATGGGT TTGAGCGTCT GGGTCACGTC AGTTGCTACA TTGTTAACGC GCCGACCAAC CAACAGGCGG AACAGGCGCG CGAGGTCCTT GCCGACGACT ACCTGATCGT ACCGGATGTG GCGCTCTCGC TGCCCACCGC GCGCATCGGC GCCGAAACCA GAGTCCGCCG TCCGCGTGCG CCGGAGTGGC CCGCCATCAG CGGCGTTCAG GAAGCGCACG CTCGCGGCAT CAGAGGAGGA AACGTCATCG TTGGCGTGCT GGATACCGGA TGCGACGCTG ATCACAATGA GTTTCTGGGA AAACGGATCG AGTTCCGGTA CGTGCCTTTC GTGCCCACAC CCGAAAGCAT GCGGGCTGTC AACGGTTTCG ACACGCACGG TCACGGAACG CACGTCTGCG GTATCATCGC CGGACGCAAC GTTGGAGTCG CGCCGGATGT CGATCTCCTG GCGGCGGCAG TCATCGAGAG CGAAACGGTC AAAACCAGCC TGGCACGGAT CGTCGTGGCG CTGGACTGGA TGTTGTCGCA CTTCAGCCGG GTGGAAAACC AGGACAAACC GATGATTATT AGCATGTCGC TTGGTTTTCG CCCGGAATGG ATCAGTGCAC CGGCGTTCAG AACGGTTACG GAAGGGATGC GGCTGCTGCT GCGCACGCTG GTGGAGGATT TCGATGTGCT CCCGATCATC GCCATCGGCA ACGACGGTCC TGGGGTGGTG CGCGCGCCCG GTTCATACGC TGAAGCGCTA GGGGTGGGAG CGGTTGATTT CGACCTCAAC CCGTGGTCCA GCAGCAGCAG CGGGCAGACG CCAGAAGGGT TGCGCAAGCC CGATCTTGTC GGGTTCGGGG TAGATATTAT GTCGAGCCTG GAACGCGACC TTCAGCGTCG CAGTCTGTAC ACCCGGATGA GTGGCACGAG TATGGCGGCG CCCTACGTGG CAGGGATCGC TGCGCTGATT GCTTCCGCCA ACCCTGGATT GCAGGGGGCA GCGCTGCGCC AGCGGCTACT GGAAACGGCG CTTCCGCTCT CGGCGCCTGC CGAACGGGTT GGCGCCGGGC TGGCAAGGTT TGTGCTATGA
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Protein sequence | MASRPGRRSS GVEKFIAVRK RTRSAAFALH EAATAEKRME IMRDAQTSRR ALELIRLGLR PHLPGQRKPV GHGFERLGHV SCYIVNAPTN QQAEQAREVL ADDYLIVPDV ALSLPTARIG AETRVRRPRA PEWPAISGVQ EAHARGIRGG NVIVGVLDTG CDADHNEFLG KRIEFRYVPF VPTPESMRAV NGFDTHGHGT HVCGIIAGRN VGVAPDVDLL AAAVIESETV KTSLARIVVA LDWMLSHFSR VENQDKPMII SMSLGFRPEW ISAPAFRTVT EGMRLLLRTL VEDFDVLPII AIGNDGPGVV RAPGSYAEAL GVGAVDFDLN PWSSSSSGQT PEGLRKPDLV GFGVDIMSSL ERDLQRRSLY TRMSGTSMAA PYVAGIAALI ASANPGLQGA ALRQRLLETA LPLSAPAERV GAGLARFVL
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