| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3313 |
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| Symbol | |
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| ID | 5540811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4323768 |
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| End bp | 4324556 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895431 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001433382 |
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| Protein GI | 156743253 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.618887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGC TCATTCTCGC AGCCGGCGCA GGGACGCGCC TTCGTCCGCT CACCGACACA
TGCCCTAAAC CGATGGCGCC GATCGCCGGG CAGCCGCTTC TGGCATGGAC GCTGGAGTGG
TTACGGCGCT ATGGCGTCAC CGAGGCGGCG CTGAATCTTC ACCACCTGCC CGACGTGGTG
CGCGCCGGGC TGGGGGATGG TTCTCGTTTT GGCATACGGT TGCGTTATGC CGTCGAAGAA
GAACTGCGCG GCACAGCTGG CGCGCTCCAC AATTTCCCCG GTTTCTTTGA TCAGACCTTT
CTCGTCATCT ACGGCGACCT GCTCCTCGAC ATCGACCTCG ACGACCTGAT ACGGTTTCAT
CGCCAGCAGG GTGCGATCAT GACGCTGGCG CTCAAACGCA CCGACACGCC ACACTCCCAG
GGCATGATTG ACATTGACAC AACCGGTCGG GTGAAACGCT TCATCGAAAA ACCTGCCGTA
TGGGATGGCG GTGATACAGC AAATGCCGGG GTCTACGTCT GCGAACCGGA GATCGTATCC
TGGACGCCAC CTGGCTTCAG CGATTTCGGG CACGATATTA TTCCGGCGTT ATTGCACGCT
GGCGTACCGG TGTATGGTCG TCCGCTGCGG GGTTACCTGC TCGACATTGG AACGCCCGCA
GCGTATGAAC AGGCGCAGCA GGAGTGGCGA GCGAGGCAAG AGGCGAGAGG TGAGCGAGGC
AAGAGGCAAG AGGTGAGCGA GGCAAGAGGC GAGGGGCAAG AGGCAAGAGG TGAGCGAGGC
AAGAGGTGA
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| Protein sequence | MKALILAAGA GTRLRPLTDT CPKPMAPIAG QPLLAWTLEW LRRYGVTEAA LNLHHLPDVV
RAGLGDGSRF GIRLRYAVEE ELRGTAGALH NFPGFFDQTF LVIYGDLLLD IDLDDLIRFH
RQQGAIMTLA LKRTDTPHSQ GMIDIDTTGR VKRFIEKPAV WDGGDTANAG VYVCEPEIVS
WTPPGFSDFG HDIIPALLHA GVPVYGRPLR GYLLDIGTPA AYEQAQQEWR ARQEARGERG
KRQEVSEARG EGQEARGERG KR
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