Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3305 |
Symbol | |
ID | 5540803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4296351 |
End bp | 4296947 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895423 |
Product | CRISPR-associated Cas4 family protein |
Protein accession | YP_001433374 |
Protein GI | 156743245 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.143494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.352212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAA GCACTTTCGA GGTGACCGAT CTGCGACAGT GGGCATACTG CCCGCGCGTC GTCTACTACC AGCACTGCAT GCCCGACATC CGACCCATGA CAAAGCTGAT GATCGCCGGC ATGGAAGAAC ACCGGGCGGA AAGTGGGCGC GAGGAGCGGC GTTCGCTGCG CACCTACGGA TTGAAACAGG GCGAACGCTT CTTCGATGTA CCACTGCGCT CAGAGACACT CGGGTTACGC GGGCGCGTCG ATCTGGTCAT CGCCCTGCCC GACCGACAGC ACGCAACCGA AGTCATCGTC GTAGAATACA AAAGCACCGA AGGCAAAGCC GGTCCGCACG TCAAACTCCA ACTCACCGCG TATGCGCTCA TGATCGAAGA AGCGTGGGGC GTGCCGGTCA AACGAGGATT CATCTACCAC ATGCCGGAGC ACAAAGCCGA AGCAGTGACA ATCAGCGCCG CGCTGCGCGA GCGTGTGTAC ACAACCGTTG CCACGATCCG CGAAACAGTC GATCACGAAC GCATGCCTGC GCCGCCCGCC TCACGCCGAC AGTGCGCCGT CTGTGAATTT CGCCGGTTCT GTAACGATGT CGTCTGA
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Protein sequence | MSESTFEVTD LRQWAYCPRV VYYQHCMPDI RPMTKLMIAG MEEHRAESGR EERRSLRTYG LKQGERFFDV PLRSETLGLR GRVDLVIALP DRQHATEVIV VEYKSTEGKA GPHVKLQLTA YALMIEEAWG VPVKRGFIYH MPEHKAEAVT ISAALRERVY TTVATIRETV DHERMPAPPA SRRQCAVCEF RRFCNDVV
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