| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3304 |
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| Symbol | |
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| ID | 5540802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4296101 |
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| End bp | 4296358 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640895422 |
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| Product | CRISPR-associated Cas2 family protein |
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| Protein accession | YP_001433373 |
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| Protein GI | 156743244 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.15937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.63909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCTGCC TGCTCATCTA CGACATTCCC AACGACCGCG CGCGACAGAA GATTGCCGAC
GCCTGCCTTG ACTACGGCTT ACAGCGTATT CAGTACAGCG CCTTCAGCGG CAATCTCAGC
CGCACCCATC AGCGCGAATT AATGACCGAA GTGAAGCGGC GATTGGGCAA AAACGCCGGT
AACATCCAAC TCTTCACCTT CCCGGACGAC ATCTGGAACG CGCGGCGTGT TATCAACCAG
GGAGAAAGCC ATGAGTGA
|
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| Protein sequence | MRCLLIYDIP NDRARQKIAD ACLDYGLQRI QYSAFSGNLS RTHQRELMTE VKRRLGKNAG
NIQLFTFPDD IWNARRVINQ GESHE
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