| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3303 |
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| Symbol | |
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| ID | 5540801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4295005 |
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| End bp | 4296021 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895421 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001433372 |
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| Protein GI | 156743243 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.597515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.540685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCTCA TCGTAGACCA ATTCGGCGTA TTTATCTCAA AGCACCAGGG GCGCATTCGC
GTCATGAAAG AGAAGGAACG TCTATCGGAA GTGCCGATCA TGCACCTGGA ACAAATCCTC
ATTTGCAGCG ACGGTGTCGG TCTCAGCAGC GACGTGGTGC GTGCCTGCGC CGAAGAAGGG
ATTCCGATCC ACTTCCTCAA CAGCGCCAAC GGCGGCGACT ATGGCACGTT CGTGCATAGC
GGCATCACCG GCATGGCGCT CACCCGCCGT GCTCAATTGC GAGCCGGTGA CGACGAGCGC
GGATTGCGTC TGGCGCAGGC GTTCGCCAGC GGCAAAATCC AGAGCCAGGC GAACATGCTG
CGCTACGCCG CCAAAAATCG CAAAGAGAAC GACCCGGACC TGCACAACGA CCTGATGCGC
ACCGCCACCG AAATCCTCGA CGCCCTCCCG CCGCTGCGCG CCGTGCGCGG CGTCCTTACC
GACGAAACCC GCGCTGCGCT GATGGGCTTC GAGGGAATGG CCGGCGCGCG CTACTGGACA
GCCGTGGCGC GCATCATTCC CGACGACCTC GGTTGGCCCG GACGCGAAAC GCGCGGTGCG
CGCGACCGCT TCAATCAGGC GCTCAACTAC GGCTACGGCG TTCTCCAGTC TCAGGTGCGC
ACTGCCCTGA TCCTTGCCGG GTTGGACCCC AATGCCGGGT TCCTCCACGC CGACCGACCG
GGCAAGCCGA GCCTGACCCT TGACCTGATC GAAGAGTTTC GCCAGGCAGT CGTCGACCGC
ACCCTCATCG GGCTGGTCAA CCGCCAGTTC GAGATTGTCC AGCGCGACGA CGGACTGCTC
GACGAGGACA CCCGCAAACG CATCGCCGAG AAAATCCTCG AACGCCTGAA CAGCACTGAG
CTCTACGAAG GCAAGCGTCA GCCGCTCCGT CACATTCTCC AATGCCAGGC GCGCCACATC
GCCACCTTTG TGCGCGGCGA ACGTCCCACC TATGAACCGT TTGTGATGGG GTGGTGA
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| Protein sequence | MHLIVDQFGV FISKHQGRIR VMKEKERLSE VPIMHLEQIL ICSDGVGLSS DVVRACAEEG
IPIHFLNSAN GGDYGTFVHS GITGMALTRR AQLRAGDDER GLRLAQAFAS GKIQSQANML
RYAAKNRKEN DPDLHNDLMR TATEILDALP PLRAVRGVLT DETRAALMGF EGMAGARYWT
AVARIIPDDL GWPGRETRGA RDRFNQALNY GYGVLQSQVR TALILAGLDP NAGFLHADRP
GKPSLTLDLI EEFRQAVVDR TLIGLVNRQF EIVQRDDGLL DEDTRKRIAE KILERLNSTE
LYEGKRQPLR HILQCQARHI ATFVRGERPT YEPFVMGW
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