| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3300 |
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| Symbol | |
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| ID | 5540798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4290395 |
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| End bp | 4291132 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895418 |
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| Product | CRISPR-associated Cas5 family protein |
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| Protein accession | YP_001433369 |
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| Protein GI | 156743240 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1688] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR01895] CRISPR-associated protein Cas5, Tneap subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.761874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCGC TGAAGATCGT GCTCGAAGGA GTGACGACCT CCTTCCGCTA CCCGCACTTT
ATGCTGGGGG TGCAGCCCAG TTTCCCGTTG CCGCCCCCGG CCACGATCTA TGGGCACGTG
TGCAGCGCGC TGGGCGACTG GGTCGAACCG GAAGGGCTGG CATTCGCCTA CCATTTCACG
GCTGCCGGCG AGGGTGAGGA CCTGGAGCAC ATCCATGTGC TCTCGGCGGC ATCGGGCAAA
TTGCCCGGCG GCGAGCGCAA GGCGCTGGAA GGGAATGTCA ATCCCTTCCG GCGTCGTATC
CTGCTCTTTC CGCAACTGAC GCTCTATCTC AACCGGCCCG ACTGGATCGA CGCTTTTCGC
GCGCCGCGCT ACCCGGTTAT CCTGGGACGC TCGCAGGACC TCGCCGGCTA CACGCGGATC
GAGGTGGTCG ATCTGAAACA GACGGAGCAT GTCTATTTTG AGCATACCCT CCTGCCCTAT
ACAATGGCGA CGCAGATCCC GGCCGGCATC GTGACGTTGA TGCCGCGCTG GATCGATTAC
CGCAACCGTC GCCGACCGGT GTTTGCCCGT TATCTGATCG TGCAGCAACG GGTGACGACG
GCGCAGATGC TGCGTTTTGA CGATCAGACG TCGCTCTACT GGAGCGATCC GACTGCGCCA
TCGGCGGGTG GTGTGCCGTT GGGATTGTGG TTTCACACGT TTGTGGGAGC AAATGATGAA
GCCCTCGCCA TGGCCTGA
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| Protein sequence | MQALKIVLEG VTTSFRYPHF MLGVQPSFPL PPPATIYGHV CSALGDWVEP EGLAFAYHFT
AAGEGEDLEH IHVLSAASGK LPGGERKALE GNVNPFRRRI LLFPQLTLYL NRPDWIDAFR
APRYPVILGR SQDLAGYTRI EVVDLKQTEH VYFEHTLLPY TMATQIPAGI VTLMPRWIDY
RNRRRPVFAR YLIVQQRVTT AQMLRFDDQT SLYWSDPTAP SAGGVPLGLW FHTFVGANDE
ALAMA
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