| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3288 |
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| Symbol | |
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| ID | 5540786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4270864 |
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| End bp | 4272114 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640895406 |
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| Product | CRISPR-associated TM1812 family protein |
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| Protein accession | YP_001433357 |
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| Protein GI | 156743228 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02221] CRISPR-associated protein, TM1812 family
[TIGR02549] CRISPR-associated DxTHG motif protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.392091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCA TTACCTTCCT CGGCGCTAGA CCGCAAGAAA CATGCTATGT CTTTCCAGAT
GGTTGCGAGC ATGTTGCGCC CTTTTTCGGG CTAGCATTGG CTCAGTACCT TCCAGATCTG
GATTTCGTTG TTTTTACTAC TGAACTGACG GCTCAATTCT ACCATCAATA TTTTGCCAGT
GCGCAAGCTG CGAGCATTCA AGCAGTTCGC ATCCCTGATG GGCGCGATGA TGCTGAATTG
TGGCAGATCT TTCAGGCTGT GGTTGAAATC ATTGAACCGA ACGAAGCGGT TGTGTTCGAT
ATTACTCACG GCTTTCGCTC GCTGCCATTC TTATCCTTCC TCGCCGCTGC CTATTTGCGC
AAAGTCAAGG CCATTCAACT AAAACATGTA TTCTTCGGTA ATTTTGAAAT GCGTGATCAG
AGTGTCACTC CTCATCGCAC GCCTGTGCTT GATCTGACCA ATTTTGTCGA ATTACTCGAC
TGGATGGTCG GGGCCGACCT GTTTGTGCGT TTCGGTGATG CCCGTGATTT GGCTACGTTG
CTGCATACGC AGCATAACCG GGTCAAGCCC GATCCAAAAA CTGCTAGTAA GGATGAAATG
GCTGCTTGGA ACAATTCACC AATTAAAGCA ACAGCGAAGA ATCTGACGAA AGTCTCAAAG
GCATTGCGCG TCGTGCGACC GGCTGAGGTT ATGGAGGTGA GCGAGCAAAT CTACCAACAG
TTACCGCAGG CTATTTCATC GATTGGTTCT CTAGCGAGGC CCTTCAATCC TCTCGCTGAG
CAAGTTATCA ATAGCTTTCA AAAGATTGCG CTTGGCGACA ATGAGCTTAA GTCCGAGCGG
GAATTGATTG GCTGGTATCT GGATCGCAAT CAGGTTTTCC AGGCAGTGGC ACTGGCGCGT
GAGTGGTTAA TTTCATGGAC AATGGCGCAG CTTGGGCTGT ATGACCAATT GCTGGAAAGA
GACGTTCGCA AGCGTGTAGA AGACGCATTG GGCGCAGAAG TGCAGAGACA AAGCAAGAAT
ATGACTGCTG AAGAACATTC GGGCGAAGGG CTTGACCTCA GCAAGTTGCC ATCATGCAAC
GATGTGGTCA AGCTCTTTGG TCAGCTCGGT GAATTACGTA ACGATTTGAT GCACGCCGGA
AAGCGAAAAA ACCCGCTTAC CGCCAATAAG GTTGAGGAAC GGGCAAGTCT TCTTTATGAA
CAAGTGAAAA AACTTGAGGT TGACAATGTC GTGAACAGCG ACTGCGCGTG A
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| Protein sequence | MKAITFLGAR PQETCYVFPD GCEHVAPFFG LALAQYLPDL DFVVFTTELT AQFYHQYFAS
AQAASIQAVR IPDGRDDAEL WQIFQAVVEI IEPNEAVVFD ITHGFRSLPF LSFLAAAYLR
KVKAIQLKHV FFGNFEMRDQ SVTPHRTPVL DLTNFVELLD WMVGADLFVR FGDARDLATL
LHTQHNRVKP DPKTASKDEM AAWNNSPIKA TAKNLTKVSK ALRVVRPAEV MEVSEQIYQQ
LPQAISSIGS LARPFNPLAE QVINSFQKIA LGDNELKSER ELIGWYLDRN QVFQAVALAR
EWLISWTMAQ LGLYDQLLER DVRKRVEDAL GAEVQRQSKN MTAEEHSGEG LDLSKLPSCN
DVVKLFGQLG ELRNDLMHAG KRKNPLTANK VEERASLLYE QVKKLEVDNV VNSDCA
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