Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3283 |
Symbol | |
ID | 5540781 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4263962 |
End bp | 4265005 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640895401 |
Product | glyceraldehyde-3-phosphate dehydrogenase, type I |
Protein accession | YP_001433352 |
Protein GI | 156743223 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.405716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGTG TCGCAATTAA TGGTTTTGGT CGAATCGGTC GTCAAAGCTT CAAAGCGATG CTCGAACAGT ATTCTGACGA CCTGGAGATC GTGGCCATAA ACGACCTGAC CGATAACGAA ACGCTGGCGC ATCTGCTGCG CCACGACTCG ACCTATGGCG CATTCGACGG CGATGTCGTG GTGACGAACG ACCGGATCAG CGTCACGTTC TATGGCGAGG ATGGTGATGA GCGCCAGATC GACATTGTGG CGCTCGAGGA ACGTGATCCG GCACAATTGC CCTGGCGTAA TCTGGGCATC GATATTGTCA TCGAGTCAAC CGGACGCTTC ACCGATGCCG AGAAAGCGCG CGCACACCTG CAAGCCGGTG CGCGTAAGGT CATTATCACA GCGCCCGCCA AAGGGGAAGA CATCACCATC TGTCTCGGCG TCAACGAAGA TCGTTACGAC AACGCCGTGC ACCACATCAT CTCGAATGCG TCATGCACCA CCAACTGTCT CGCGCCGGTT GCGAAAGTGC TCAACGACCG CTTTGGCATC CGCCGTGGAT TGATGACGAC GATCCACTCG TACACCATGG ATCAGAACTT GCAGGACAAT GTCCACAAGG ATTTGCGGCG CGCGCGCGCG GCTGCGATGA ACATTGTGCC AACCACGACC GGTGCGGCGC GCGCGGTGGC GCTGGTTATC CCCGAACTCA AAGGCAAGTT CGACGGGTTC GCCGTGCGGG TGCCGACGCC GACCGTCTCG ATGATCGACT TCGTGGTCGA ACTCGAGCGG AGCGCCTCTG TCGATGAGGT GAATGAGACC TTCCGCGAAG CGGCACAGAG CAAGGAACTG GAAGGCATTC TGGAAGTGAC CGAAGAGGAA CTGGTATCGA CTGACTTTAT CGGTTCGACG GCATCAGCCA TTGTCGATCT GCCGCTGACG ATGGCGCTGG GGGGCAACCT GATCAAGGTG ATCGCCTGGT ACGACAACGA ATGGGGCTAC GCCACGCGCA TCGCCGATCT GACGGCATTC ATTGCCGATG AGATGGAGGA ATAA
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Protein sequence | MARVAINGFG RIGRQSFKAM LEQYSDDLEI VAINDLTDNE TLAHLLRHDS TYGAFDGDVV VTNDRISVTF YGEDGDERQI DIVALEERDP AQLPWRNLGI DIVIESTGRF TDAEKARAHL QAGARKVIIT APAKGEDITI CLGVNEDRYD NAVHHIISNA SCTTNCLAPV AKVLNDRFGI RRGLMTTIHS YTMDQNLQDN VHKDLRRARA AAMNIVPTTT GAARAVALVI PELKGKFDGF AVRVPTPTVS MIDFVVELER SASVDEVNET FREAAQSKEL EGILEVTEEE LVSTDFIGST ASAIVDLPLT MALGGNLIKV IAWYDNEWGY ATRIADLTAF IADEMEE
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