Gene Rcas_3276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3276 
Symbol 
ID5540774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4253607 
End bp4255034 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content62% 
IMG OID640895394 
Productserine/threonine kinase protein 
Protein accessionYP_001433345 
Protein GI156743216 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase
[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.162967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.186689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTCT CCCTGCAAGG AGCGCATACG CAGCGCCATA TGTCTGAACT GCTCGCGCCG 
GAAACGATCA TCCACGGTAC ACACGCCGGG TACCGCATCA TCTCACTGAT AGGTCGCGGC
GGGATGGGGG CGGTCTACCG CGCGCTACGC CTGGCAGACT CGACCATTTG GGCATTGAAA
GAAATGCGCC CGTTGGAAGA CCTGCCGACT GCGGAATTCG AAGAGAATCG GCGACTGTTT
TTGCAGGAAG CCGAACTCCT CAGCAAACTC AGTCACCCTG GGTTGCCGGT CGTTGCCGAC
CTGTTCGAGT ATCAGGGACG CCCCGTGATG ATCATGGAGT TCGTTCCGGG ACAGACGCTC
GAGCACCGCA TCCGCGACGC CAATGCGCCA TTGCTCGAAC AACAGGTGGT CGGCTATGGC
ATTCAACTGG CGCGTATTCT GCACTACCTC CATACGCGCA CTCCGCCGAT CATCTACCGC
GACCTGAAGC CATCGAACGT GATGCTGACC CCGGAGGGAG TGCTGAAACT GATCGACTTC
GGCGTTGCGC GCACCTACAA AGTGCGTAAG GCGAAAGATA CGATTGCGAT GGGGTCGGCG
GGCTATGCGC CGCCAGAACA GTATGGCAAG GGGCAAACCG ATGCGCGCTC CGATGTGTAT
GCGCTCGGCG CGACACTGCT CCACCTGCTG ACGAACCTGC CGCCGATTCC GTTGCAAACA
CCTGCGAAGG GAAGTATTCG CAAACTCAAT CCGTCGGTTG ATGCGCGCAC CGAAGAGACG
ATCATCAAGG CAATGAACCT CGATCCGTCC AGGCGGTTCA GCAGTGCGCT CGAATTCGAG
CAGGCGCTCC ATCGCTGTCT CGATGCGCCA TTTGTCGATC CCGCCGCGCG CGCCACGCCG
CCGCCGCCGA TCATCCCGCC GGTTGTGACA CCCTCCTCGC CCGAAACGAT CCTGCAAGCG
CCGGCGACGC CGGTTGCGCC TCCAATCACG CCGGCGCTGC CGCCGATCGC ACCGCCGGAA
GGTCATACAT GCGCGCGTTG TGGACGGATC AACAAACCTC ATGCGCGCTT CTGCGCCGGT
TGCGGCGCGC CGCTCAGCGC CGCCATGGCC GCGCCGCGCC TGATCATTGC CTCGCCGCGC
AGCACGTTTG AGCAAAAGAT CGAACACACG CCACTGCGTA TCGGCCGCCG CGATCCGCGC
CAGCACCACT ACCCGGAACT CGACCTGGCG GAACACGACC GCGGCATCGC GTCGCGCCAT
CATGCGCTGA TCGAACGCAA TGGCGACTAC TACACCCTGA CTGACCTTGG CTCGACCAAC
GGCACACTCG TCAATGGGAC GCCGCTGCCG CCACACCAGA AACATCGCCT GCGTTCCGGC
GACCGGATCA AGATTGGTGA AGTGGAAATC GAGTTTCGCT GGGGATAG
 
Protein sequence
MRFSLQGAHT QRHMSELLAP ETIIHGTHAG YRIISLIGRG GMGAVYRALR LADSTIWALK 
EMRPLEDLPT AEFEENRRLF LQEAELLSKL SHPGLPVVAD LFEYQGRPVM IMEFVPGQTL
EHRIRDANAP LLEQQVVGYG IQLARILHYL HTRTPPIIYR DLKPSNVMLT PEGVLKLIDF
GVARTYKVRK AKDTIAMGSA GYAPPEQYGK GQTDARSDVY ALGATLLHLL TNLPPIPLQT
PAKGSIRKLN PSVDARTEET IIKAMNLDPS RRFSSALEFE QALHRCLDAP FVDPAARATP
PPPIIPPVVT PSSPETILQA PATPVAPPIT PALPPIAPPE GHTCARCGRI NKPHARFCAG
CGAPLSAAMA APRLIIASPR STFEQKIEHT PLRIGRRDPR QHHYPELDLA EHDRGIASRH
HALIERNGDY YTLTDLGSTN GTLVNGTPLP PHQKHRLRSG DRIKIGEVEI EFRWG