Gene Rcas_3264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3264 
Symbol 
ID5540762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4238566 
End bp4239279 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content61% 
IMG OID640895383 
Productmethyltransferase type 11 
Protein accessionYP_001433334 
Protein GI156743205 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.776715 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATGC ATAGGATTGA TGCATTACAC GAACCGCTCA CACCAGTGCT CACTGCCATC 
CTTGCAACCC TTCCGCCCCT TGCAGGTCCG TTGCTCGATG TCGGCTGCGG CGCAGGCGCC
AAAATCCCAT TGCTCCGTGC GAAGATGAAT CACACAGCAC CGCTCATCGG TCTGGATTGC
GACCTGCCGG CGTTGCAGGA AGCCGTAATG GCCGACAGAT TGCTGGCGGT TGCCGGAGAT
GCGCATGCGC TGCCGCTGCG CACCGCATCC TGTGGCGCGG CAGTGTGCAG TGCTGTGCTG
GGATTGCTGC GCGATCAACG CACAGCACTG CGCGAACTAC GGCGCGTAGT GCGTCCAGGG
GGATGGATTC TGATAGTGAC CGCAACGACG GCATGGACTC CCTGGTCCGC TCAGATGCGC
AGTTGGGTTA CGAGGCTCTG TGAGCGGGTT GAGATGCCTG GATCGCTGTT GTTTGCGACG
CCTGAACCGG CCGCTGATCT TGCTGCGTTG CTGCGAGAAA GCGGTTGGAG CGAGGTGCGC
ACCGGTGCAT TTGCGATAGA AGCAGGTAGC GATGCTCCGC CAGTGCTGCC GTTGCTGACG
CGAGAGGTGG TGGAGCGCCA TTTGACGCCT GTAGAAGTGC AGGAGTACGA CACGGTTGTT
GCAGACGCCG GGATTGAACT GCTCCCGTTG ATCCTGGCGG CGACAGGGAC ATGA
 
Protein sequence
MPMHRIDALH EPLTPVLTAI LATLPPLAGP LLDVGCGAGA KIPLLRAKMN HTAPLIGLDC 
DLPALQEAVM ADRLLAVAGD AHALPLRTAS CGAAVCSAVL GLLRDQRTAL RELRRVVRPG
GWILIVTATT AWTPWSAQMR SWVTRLCERV EMPGSLLFAT PEPAADLAAL LRESGWSEVR
TGAFAIEAGS DAPPVLPLLT REVVERHLTP VEVQEYDTVV ADAGIELLPL ILAATGT