| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3258 |
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| Symbol | |
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| ID | 5540756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4231730 |
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| End bp | 4232665 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640895377 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001433328 |
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| Protein GI | 156743199 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATTTA CATCGACACA ACTGATCGTT GTCGTCAGCG TTCTCACCGC CCTCATCTTG
CTGCCGCTGG TCGTGATTCT GTTGGTGCGC CTCTTCATCA AAGACGAAGC CCCCACCGAC
GGTGAAGAGG TTGTGTCGAA TCTGACCGAG TTCAACAGCA TTGGCGATGT CTGGCGCGCA
TTCGTGCCTC ACCTGGTCGA ACTGCGTGAT CGAATGGTCA AGGCGCTGAT CGCCGTCGCC
ATCGGTACGA TGATTGGGTT CTGGATTGTT AATAGTCCGA TCCTGCTCGG CGATCCCTTG
CCCGTTTTTC TGGTGCGCCA TCTCGCGCCT CCCGGAACGC AGTTGCAGGG TATCGATACC
GGCGAGGTGT TCTTCGCCTA TATGCGCATG GCGCTGGTGG TCGGCATCAC ACTGGCGATG
CCGTTCGTGT TGTATCAGAT TGTGGCATTT TTTCTGCCAG GGTTGCTGCC GAACGAAAAG
CGTATCTTGT TTATTGCGCT GCCGTTCGTC ACCGAATTGT TCATCGCCGG CGTGGCATTC
GGCTGGTTCT TTACTGTTCC GGCTGCGCTC GGCTTCCTGC TGGGGTTCGG CGTCGATGGA
ACGACGATTA TCACCCAACC GCGCGTCGAT AGTTTTATCG GGACGGTTGC GACACTGCTC
CTCTGGAACG GGCTGATCTT TCAATTGCCT GCGATTGTGT ACGTCCTGGC GCGGCTTGGC
GTTGTGACTG CGGCGCGCCT GGCAGCGACA CGTCGGTATG CGATTGTGAT TATCTTCATT
ATCGCTGCCT TCATTACCCC TACCGGCGAC CCCTACAATC TGTTGTTGCT TGCAATCCCC
ATGTATCTGT TGTACGAACT GGGCATCATT CTGGCGCGTT TCGTTCCCAA ACGCCATACC
GACGAGGGAC AGGCGACGGC GGCGTCGACG GGGTAA
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| Protein sequence | MEFTSTQLIV VVSVLTALIL LPLVVILLVR LFIKDEAPTD GEEVVSNLTE FNSIGDVWRA
FVPHLVELRD RMVKALIAVA IGTMIGFWIV NSPILLGDPL PVFLVRHLAP PGTQLQGIDT
GEVFFAYMRM ALVVGITLAM PFVLYQIVAF FLPGLLPNEK RILFIALPFV TELFIAGVAF
GWFFTVPAAL GFLLGFGVDG TTIITQPRVD SFIGTVATLL LWNGLIFQLP AIVYVLARLG
VVTAARLAAT RRYAIVIIFI IAAFITPTGD PYNLLLLAIP MYLLYELGII LARFVPKRHT
DEGQATAAST G
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