| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3253 |
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| Symbol | |
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| ID | 5540751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4228692 |
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| End bp | 4229444 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895372 |
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| Product | 3-oxoacyl-(acyl-carrier-protein) reductase |
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| Protein accession | YP_001433323 |
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| Protein GI | 156743194 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCT CGCTCAAAGG CAAAATTGCC GTCGTCACCG GCGGATCACG TGGGATTGGA
CGGGCAATTG CGACGACCCT GGCGGCTGCC GGTGCGACGG TTGTCGTCAA CTATCAACGG
AATGCCGCCG CAGCAGAAGA GACCGTCGCT GCGATCACCG CCGCCGATGG CGCTGCAATC
AGCATGCAGG CGGATGTGAG CGCGGCAGAG GAGGTCGAGC GCCTGTTCAA AACTGTGATC
GAACGGTATG GCACGGTCGA TATTCTGGTC AACAATGCCG GCATAACCCG TGATACCCTG
CTGCTGCGCA TGAAAGAAGA CGACTTCGAT GCCGTGATCG ACACCAATCT GCGCGGGGTG
TATCTGTGTA CAAAAGCGGC GTTGCGCCCG ATGACAAAGG CACGCAGTGG GCGAATCATT
AACATTACGT CGGTGGTTGG GCTGATCGGC AATGCGGGGC AGAGCAACTA CGCGGCTGCA
AAAGCCGGAA TCATTGGGTT CACCCGCGCC GTTGCGCGCG AAATGGCGTC GCGCAACATT
ACGGTCAACG CCGTGGCGCC GGGGTATATC GAAACCGAGT TGACCGCCGG GCTTGGCGAT
CAGGTGCGTA CTGCTATTCT GGAAGCGATC CCGCTCGGAC GCCTCGGCAC GCCTCAAGAT
GTCGCCAACC TGGTCTGTTT CCTGGCATCC GATGCAGCCG CGTATATCAC AGGGCAAACT
CTGACCGTCG ATGGCGGCAT GGTCATGAGT TAG
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| Protein sequence | MQISLKGKIA VVTGGSRGIG RAIATTLAAA GATVVVNYQR NAAAAEETVA AITAADGAAI
SMQADVSAAE EVERLFKTVI ERYGTVDILV NNAGITRDTL LLRMKEDDFD AVIDTNLRGV
YLCTKAALRP MTKARSGRII NITSVVGLIG NAGQSNYAAA KAGIIGFTRA VAREMASRNI
TVNAVAPGYI ETELTAGLGD QVRTAILEAI PLGRLGTPQD VANLVCFLAS DAAAYITGQT
LTVDGGMVMS
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