Gene Rcas_3251 details

Gene Information

• Locus tag: Rcas_3251
• Symbol: nrdR
• ID: 5540749
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Roseiflexus castenholzii DSM 13941
• Kingdom: Bacteria
• Replicon accession: NC_009767
• Strand: +
• Start bp: 4227305
• End bp: 4227763
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640895370
• Product: transcriptional regulator NrdR
• Protein accession: YP_001433321
• Protein GI: 156743192
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGGTGTC CCTACTGCCA GCATCCCGAC AGCGACGTTA TCGATACGCG CAAACTCCAC 
AACGGCGAAA CAATCCGCCG GCGACGCAAG TGTGAAGCGT GCGGACGGCG TTTCACCACC 
TACGAGCGCG TCGAGACCGT CAGCATCACC GTCGTTAAGA AAAATGGCGA ACGGGAGCCT 
TATGAACGAG AGAAACTGAT GCGTGGCGTT CGCACCGCAT GCTATCGCCG TCCTGTTCCG 
GCGCAGGCGC TTGAGTCCCT GGCGAATGAT ATCGAAGCAG AATTGATGGC GCTCGACGAG 
CCGGAAGTTC CATCGTCGCT CATCGGCGAT ATGGTCATGC GACGCCTCCG CACCATCGAT 
GATGTCGCCT ACATTCGCTT CGCCTCGGTG TATCGGTCAT TTGCCGACAT TGGCAAACTA 
CGCGAGGCGG TTGACGAACT GCTGGAGCAG GGGCGCTGA 

 

Protein sequence

MRCPYCQHPD SDVIDTRKLH NGETIRRRRK CEACGRRFTT YERVETVSIT VVKKNGEREP 
YEREKLMRGV RTACYRRPVP AQALESLAND IEAELMALDE PEVPSSLIGD MVMRRLRTID 
DVAYIRFASV YRSFADIGKL REAVDELLEQ GR