| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3236 |
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| Symbol | |
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| ID | 5540734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4205224 |
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| End bp | 4206666 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895357 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001433308 |
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| Protein GI | 156743179 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.703732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG TGATCACACT GCATCTACCG GCGGAAGCGC GCGCCGACCA ATCGCGCGAC
GCAACGCCGC GTGAGCGCCG CTATTATGTC TGGACGGTCG GCTGCCAGAT GAACGTGTCT
GACTCTGAGC GCCTGGAAGC GGCGTTGCAA GGGGTCGGGT ATGCGCCTGC CGAACGCCCG
GAAGACGCGA GTTTTATTGT GCTCAACTCG TGCAGTGTGC GCGCGTCTGC CGAAGAGCGC
ATTCTGGGCA AACTGAGCGA GGTGCAACGC ATCAAGCGCA ACCACCCCGA TACAAAGATT
GTGCTCTGGG GGTGCATGGT TGGTCCTGGC AATCAGTCGA TCTTTCAGAG CCGCTTGCCG
ATGGTGGACC ATTTTGTGTC GCCTTCGGCA GTCGATGAGG TGCTGGCGCT CGCGCCCAAC
CCGATCTATC AACTCGATGA GCCGGCGCTG CCGGTGGCGC GCTGGGATCA TCCGCCGGTC
TCGGTACACG TGCCGATTCA GTACGGCTGC AATATGTCTT GCTCGTTCTG CGTCATCCCG
CTGCGCCGCG GGCGCGAACG CAGCCGTCCG CTCGCGGAGA TTGTCGAAGA GTGCCGCCGG
ATTGTGGCGC GCGGCGCAAA AGAGATCACG TTGCTCGGGC AGATCGTCGA CTCGTGGGGG
CATGATCTTC CCGGCCGCCC CGACCTGGCA GATTTGCTGC GCGCCGTGCA CGAAATCCCC
GGCTTGCTCC GGTTGCGCTT TCTGACGTCC CATCCCGCAT GGATGACCGA CCGCCTGATT
GCGGCGGTGG CGGAACTGCC GCGCTGCATG CCGGATATTA ACCTGCCGGT GCAGGCAGGC
GACGATGCGC TGCTCAAAAT CATGCGGCGC GGCTACACCG TACAGCGCTA CCGCGAACTG
ATAGCGAAGA TCCGCGATGC CATCCCGCAT GTGTCGCTGA CGACCGATGT CATTGTCGGG
CATCCGGGCG AAACGCGCGA ACGGTTCGAG GGCACAAAGC GATTGCTCGA CGAAATCCGG
TTCGATAAGG TGCATATCGC GGCATTCTCG CCGCGCCCCG GCACACGCGC CGCCGAAATG
GAACTCGACC CGGCGCTGGC AGTGCCCGAA GGTGAAAAGC AACTGCGGCG CATCGAACTC
GAGCGAATCC AGGAACAGAT TGCAACTGAA CGCAATGCGC GCTTCCTGAA TCAGACGGTC
GAAGTGCTGG TCGAAGGCGA GCATAAGGGC AAATGGCGCG GGCGCACGCC AGGCAACAAA
CTGGTCTTCT TCAGCGACCC GCGCGACCGA ACCGGTCAGT TGGTGAACGT GCGCATCATC
CATACCGGTC CGTGGTCATT GCAGGGGGTT CTGGCGCAGT CTGCCGGGGA ATCGCCGATG
TTGAACGGCG CCCCTGAACC GCTCGACGCC ACGCCTGTGA TGCAGGGAGC AATCACCCGA
TGA
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| Protein sequence | MTDVITLHLP AEARADQSRD ATPRERRYYV WTVGCQMNVS DSERLEAALQ GVGYAPAERP
EDASFIVLNS CSVRASAEER ILGKLSEVQR IKRNHPDTKI VLWGCMVGPG NQSIFQSRLP
MVDHFVSPSA VDEVLALAPN PIYQLDEPAL PVARWDHPPV SVHVPIQYGC NMSCSFCVIP
LRRGRERSRP LAEIVEECRR IVARGAKEIT LLGQIVDSWG HDLPGRPDLA DLLRAVHEIP
GLLRLRFLTS HPAWMTDRLI AAVAELPRCM PDINLPVQAG DDALLKIMRR GYTVQRYREL
IAKIRDAIPH VSLTTDVIVG HPGETRERFE GTKRLLDEIR FDKVHIAAFS PRPGTRAAEM
ELDPALAVPE GEKQLRRIEL ERIQEQIATE RNARFLNQTV EVLVEGEHKG KWRGRTPGNK
LVFFSDPRDR TGQLVNVRII HTGPWSLQGV LAQSAGESPM LNGAPEPLDA TPVMQGAITR
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