| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3227 |
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| Symbol | |
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| ID | 5540725 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4197771 |
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| End bp | 4198154 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895348 |
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| Product | HEPN domain-containing protein |
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| Protein accession | YP_001433299 |
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| Protein GI | 156743170 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.082492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGAATC GCTCACAGGA CTGGTTCAAA CAGGCGGAAC GCGACCTGGA GCAGGCGATT
GACTCGCAGC GCGCCGGAAG GCACGAATGG GCTTGCTTCG CTGCGCATCA GTCGGCAGAA
AAAGCCGTCA AAGCGCTGCA TCTCGCGCAC CGGCAGGAAG CCTGGGGACA CGTCGTGGCC
CGTTTGCTCG CCGATCTGCC GCTGAATGTT CCGCCCGATC TGATTGACAA AGGGCGCGTG
CTGGACAACT TCTACATCCC GACTCGTTAT CCCAATGGAC ATTCGGCGGG CGCGCCCTAT
GAGCATTACG GCGTTCTTCA GAGTGAACAG GCAATTGCGT ATGCGCGCGA GATCGTTGAA
TTCGTCCGTC ATGAAATGGC CTGA
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| Protein sequence | MPNRSQDWFK QAERDLEQAI DSQRAGRHEW ACFAAHQSAE KAVKALHLAH RQEAWGHVVA
RLLADLPLNV PPDLIDKGRV LDNFYIPTRY PNGHSAGAPY EHYGVLQSEQ AIAYAREIVE
FVRHEMA
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