| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3219 |
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| Symbol | |
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| ID | 5540717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4186509 |
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| End bp | 4187837 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895340 |
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| Product | aminotransferase class-III |
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| Protein accession | YP_001433291 |
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| Protein GI | 156743162 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.338952 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACAC CATCAGCAAC GGATCTGCTC GAGCAGACGG CATTTCTTTC TCCAGTTTGG
GCGCGCTACA GCGATATTCT GGTCGAGCGC GGTGAAGGGG TTTATCTATA CGATGTCGAA
GGGCGGCGGT ATCTCGATTT CACCTGCGGC ATCGGCGTGA CGAATACCGG TCACTGTCAT
CCGCGCGTGG TGGCGGCTAT CCGTGAGCAG GCTGGCTTGC TGCTGCATGG TCAGGCGAAT
ATTGTCTATC ATCGTCCGAT GCTCGAACTG GTTGCTGAAT TGCGCACCAT TGCGCCACTT
GAACTCGACA GTTTCTTTTT CAGCAACAGT GGCGCCGAGG CGGTTGAGGG CGCGATCAAA
CTGGCGCGCC AGGCGACCGG TCGGAGTGAT GTGATCGCTT TCGAGGGCGG GTTCCACGGT
CGCACGGCGG GCGCGCTCGC GCTCACGAGC AGCAAGGGCA AGTACCGCCA CGCCGTCGCG
CCGTTGCCGG CAGGCGTTCA CTTTGCGCCA TATGCGGCCT GTTTCCATTG CGCTGTCGCG
CGCGCCGCCG GCGCCGATCC GTCGTTCATC TCCGGCGCGG CGCCCGACGA TGCCGGGTGC
TGTGGCAATC CGCTGCGGCA GATTGAGCAT ATCCTCCACA CGCAGACGAC ACCCGAGGAC
GTTGCGGCGG TACTGGTCGA GCCGGTGCTT GGCGAGGGCG GCTATATTGT TCCGCCAGCA
TCGTTTTTGC AAGGGTTGCG CCGGCTCTGT GATCGGTATG GCATTCTGCT GATCGTTGAT
GAAGTGCAGA GTGGCTTTGG CCGCACCGGT CGCTTCTTTG CGATTGAACA TTTTGGCGTC
ATACCCGATA TTATGACGGT CGCTAAGGGT ATTGCATCGG GATTGCCACT TTCTGGTATC
ATTGCACGGC GCGTCATTAT GGAACGCTGG CAACCAGGGT CCCATGGCGG CACCTATGGT
GGCAACGCTG TCGCCTGTGC TGCGGCGGTC GCAACAATTC GAGCGATGCG TGAGGAGCGC
ATGGTCGAAA ACGCAGCGCG CCAGGGAGCG CTGCTCAAGG CGGAATTGTT GCGTCTCAAG
GCACAGGTTC CGTCGATTGG CGATGTGCGC GGATTGGGAT TGATGATTGG CGTTGAACTG
AGAACGGCGG AGGGTATGCC CGATGCTGCG CTGGCGAAAC GTGTCGTCGC CGAATGCCGC
ACGCGCGGAT TGCTCCTGCT GACCTGCGGA CCATACGACA ACGTGATTCG CTTCATTCCG
CCGTTGGTTG TCGAAGAAGA TCAGATTCGT GACGCTGTGC GCATCTTCGA GGATGCACTG
GCGTCTTAG
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| Protein sequence | MTTPSATDLL EQTAFLSPVW ARYSDILVER GEGVYLYDVE GRRYLDFTCG IGVTNTGHCH
PRVVAAIREQ AGLLLHGQAN IVYHRPMLEL VAELRTIAPL ELDSFFFSNS GAEAVEGAIK
LARQATGRSD VIAFEGGFHG RTAGALALTS SKGKYRHAVA PLPAGVHFAP YAACFHCAVA
RAAGADPSFI SGAAPDDAGC CGNPLRQIEH ILHTQTTPED VAAVLVEPVL GEGGYIVPPA
SFLQGLRRLC DRYGILLIVD EVQSGFGRTG RFFAIEHFGV IPDIMTVAKG IASGLPLSGI
IARRVIMERW QPGSHGGTYG GNAVACAAAV ATIRAMREER MVENAARQGA LLKAELLRLK
AQVPSIGDVR GLGLMIGVEL RTAEGMPDAA LAKRVVAECR TRGLLLLTCG PYDNVIRFIP
PLVVEEDQIR DAVRIFEDAL AS
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