Gene Rcas_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3218 
Symbol 
ID5540716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4185828 
End bp4186472 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content60% 
IMG OID640895339 
Producthypothetical protein 
Protein accessionYP_001433290 
Protein GI156743161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.279999 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACATC GTGCGCCGTA TCGGGTTGCG TTACAGGCGC TGCAATCCGA CCGACTTCGC 
CGCGATTACG CGGATCTTGC CGCTGAGCCA CAGTATCGGC TGGTTGGCGA GTTCTTCTTT
ACCGAGCTAT ACGGTCCGCG CGACTTTAGT GCGCGGGATA CGCAGGCGCG CCGGCTGCAT
CTGCTTGTCC AGAGTTTTCC GGGGGTGGTG ATCCGCGATG TTGAACAGGT GCTCGAACTG
CTCGACCTGA CGAACCGCCT GGACGATGAG GTGGTCGAGC AGTTGATTGC GCTGGGTGCG
CCGCTCGACT TCGATATGGC GATGTACGAA CGCGCCTATC GTCTCGCCGA TAATTACGCC
GACCGGGTGC GCCAGATCGA GTTGGTGCGC CAGTCGCTCT ATAATGTCGC GCGCCTGACG
CGCAACCCGC TCATGGGGAT TGCGCTGGAT CGCACGAAAG GGCTGGCGGA TATGCTCGGC
ATGAGCGATA TCCATCGATT TCTGCGCGTT GGGTATAAAT CGGTGTTGCC GGTGCGCGAT
ATGCCGCGCT TTATCGAGAC CATCGCCGTG CGCGAGATGA ACCGTCTCGA CCGGATCTAT
GCCGATCAGT TGCAGCAGAA GAAAGGAGCG CCGTCATCCG CGTAG
 
Protein sequence
MPHRAPYRVA LQALQSDRLR RDYADLAAEP QYRLVGEFFF TELYGPRDFS ARDTQARRLH 
LLVQSFPGVV IRDVEQVLEL LDLTNRLDDE VVEQLIALGA PLDFDMAMYE RAYRLADNYA
DRVRQIELVR QSLYNVARLT RNPLMGIALD RTKGLADMLG MSDIHRFLRV GYKSVLPVRD
MPRFIETIAV REMNRLDRIY ADQLQQKKGA PSSA