Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3218 |
Symbol | |
ID | 5540716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4185828 |
End bp | 4186472 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640895339 |
Product | hypothetical protein |
Protein accession | YP_001433290 |
Protein GI | 156743161 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.279999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACATC GTGCGCCGTA TCGGGTTGCG TTACAGGCGC TGCAATCCGA CCGACTTCGC CGCGATTACG CGGATCTTGC CGCTGAGCCA CAGTATCGGC TGGTTGGCGA GTTCTTCTTT ACCGAGCTAT ACGGTCCGCG CGACTTTAGT GCGCGGGATA CGCAGGCGCG CCGGCTGCAT CTGCTTGTCC AGAGTTTTCC GGGGGTGGTG ATCCGCGATG TTGAACAGGT GCTCGAACTG CTCGACCTGA CGAACCGCCT GGACGATGAG GTGGTCGAGC AGTTGATTGC GCTGGGTGCG CCGCTCGACT TCGATATGGC GATGTACGAA CGCGCCTATC GTCTCGCCGA TAATTACGCC GACCGGGTGC GCCAGATCGA GTTGGTGCGC CAGTCGCTCT ATAATGTCGC GCGCCTGACG CGCAACCCGC TCATGGGGAT TGCGCTGGAT CGCACGAAAG GGCTGGCGGA TATGCTCGGC ATGAGCGATA TCCATCGATT TCTGCGCGTT GGGTATAAAT CGGTGTTGCC GGTGCGCGAT ATGCCGCGCT TTATCGAGAC CATCGCCGTG CGCGAGATGA ACCGTCTCGA CCGGATCTAT GCCGATCAGT TGCAGCAGAA GAAAGGAGCG CCGTCATCCG CGTAG
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Protein sequence | MPHRAPYRVA LQALQSDRLR RDYADLAAEP QYRLVGEFFF TELYGPRDFS ARDTQARRLH LLVQSFPGVV IRDVEQVLEL LDLTNRLDDE VVEQLIALGA PLDFDMAMYE RAYRLADNYA DRVRQIELVR QSLYNVARLT RNPLMGIALD RTKGLADMLG MSDIHRFLRV GYKSVLPVRD MPRFIETIAV REMNRLDRIY ADQLQQKKGA PSSA
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