| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3217 |
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| Symbol | |
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| ID | 5540715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4184874 |
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| End bp | 4185839 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895338 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_001433289 |
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| Protein GI | 156743160 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.304058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGCA AGCGTGCTCT CATTACCGGC ATCACCGGGC AGGACGGCTC GTACCTGGCA
GAGTTTCTGC TCGACCAGGG GTACGAGGTC ATCGGGATGA TCCGACGTTC CAGCACCGTC
AATTTCGAGC GCATCCGCCA CATTCAGGAT CGTATCACCC TCACCCCTGG CGACCTGCTC
GATGAAGTCT CGCTCATCCA TATGCTCCGC GAGCACCGTC CCGCCGAGGT CTACAACCTG
GCGGCACAGA GTTTCGTCCA GACCTCGTTT TCGCAACCCG TTTTTACCGG CGAGGTGACG
GCGCTTGGCG TGACACGCCT GCTCGATGCC ATTCGTATCG TTGATCCGGA GATTCGATTC
TACCAGGCCA GTTCGTCCGA AATGTTCGGC AAGGTTGTCG AAGTGCCGCA GCGCGAAACC
ACCCCCTTCT ACCCGCGTTC ACCCTACGGG GTCGCCAAGG TCTACGGGCA CTGGATCACC
GTCAATTACC GCGAAAGTTA CGGCATGCAC GCGAGCAGCG GCATCCTCTT CAACCACGAA
TCGCCGCGCC GTGGGCTGGA GTTCGTGACA CGTAAAATCT CCCATGGCGT TGCGCGCATT
GCCCTCGGAC TCGACACCGA ACTACGCCTG GGCAACCTCG ACGCGCAGCG CGACTGGGGA
TTCGCCGGCG ATTACGTGCG CGCCATGTGG CTCATGCTCC AGCAGGATCA GCCTGGCGAC
TACGTTGTTG CCACCGGGCA GACACATTCG GTGCGCCGGT TCTGCGAACT CGCGTTTGGC
TATGCCGGGC TGGACTACCA AAAGCATGTT GTTGTGGATG AACGCTTCTT CCGACCAGCC
GAAGTCGATC TGCTGGTCGG CGACCCTTCC CGCGCCTATG AACAACTGGG ATGGAAGCCG
GAAGTGTCGT TTGAGCAACT GGTGGAGATG ATGGTCGAAG CCGACATCCG TCTGCTACGC
GGATGA
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| Protein sequence | MARKRALITG ITGQDGSYLA EFLLDQGYEV IGMIRRSSTV NFERIRHIQD RITLTPGDLL
DEVSLIHMLR EHRPAEVYNL AAQSFVQTSF SQPVFTGEVT ALGVTRLLDA IRIVDPEIRF
YQASSSEMFG KVVEVPQRET TPFYPRSPYG VAKVYGHWIT VNYRESYGMH ASSGILFNHE
SPRRGLEFVT RKISHGVARI ALGLDTELRL GNLDAQRDWG FAGDYVRAMW LMLQQDQPGD
YVVATGQTHS VRRFCELAFG YAGLDYQKHV VVDERFFRPA EVDLLVGDPS RAYEQLGWKP
EVSFEQLVEM MVEADIRLLR G
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