| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3215 |
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| Symbol | |
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| ID | 5540713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4182606 |
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| End bp | 4183595 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895336 |
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| Product | oxidoreductase domain-containing protein |
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| Protein accession | YP_001433287 |
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| Protein GI | 156743158 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0771835 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGCT CGCCCATTCG CTGGGGTATT CTCAGCACCG GACGCATCGC TGGAGTTTTC
GCCGAAGCGT TGCAGTCGCT CGACGACGCG CGCCTGGTGG CGGTGGGGTC GCGCAGCGCC
GATGCTGCCG CTGCATTTGG CGACCGTTTC AACGTACCGC GCCGCTATGC GTCGTATGAG
GAACTTGCCG CCGATCCTGA AGTGGATATC GTGTACATTG CAACGCCGCA TGCGCTGCAC
GCTGAGAATT GCCTGCTCTG CTTGCACTAC GGGAAGGCGG TGTTGTGCGA GAAGCCATTC
ACAATCAATG CGCGTCAGGC GGCTGAGGTC ATCGCCGTTG CCCGCGAGCG CGGCATGTTT
CTGATGGAAG CCATGTGGAC GCGCTTCCTC CCGGCAATCG CGCGGTTGCG CGAATTGCTG
GCAGCCAACG CGATTGGCGA GGTGCGCATG ATCGCCTCCG ATTTTGGGTT CCGCAGCAGT
GTCGATCCGC GCAGTCGACT GTTCGACCCG GCGCTCGGTG GAGGCAGTCT CCTCGATGTG
GGGGTCTATC CGGTATCGCT GACCTCAATG ATCTTCGGCG GCGAACCGGA ACGGATTGCG
ACCCTGGCGC ACCTCGGCGC AACCGGCGTC GACGAGGAGG CGGCCATGAT CCTCGGCTAC
AGCAGTGGGC GAATGGCGAT GCTCTGGAGC GCCATCCGTA CTGAGACGCC GCATGAAACG
ACGATTATGG GAACGGACGG CATGATCCGC GTCCATCCCC AGTGGTGGCG CGCCAGGACC
CTCACGCTGA TCCGAGGCGG ACGTGCTGAT GAGGTGATCG AAGCGCCCTA CAGCGGGAAT
GGCTACCAGT ATGAAGCGAT AGAAGCCATG CGCTGCCTGC GCGCCGGTAT GACCGAAAGC
CCGGTCATGC CGCTCGACGA GACCCTTGGC ATTATGCGCA CGCTGGACGC CATTCGAGCG
CAGTGGGGTC TGACCTATCC AATGGAATGA
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| Protein sequence | MTGSPIRWGI LSTGRIAGVF AEALQSLDDA RLVAVGSRSA DAAAAFGDRF NVPRRYASYE
ELAADPEVDI VYIATPHALH AENCLLCLHY GKAVLCEKPF TINARQAAEV IAVARERGMF
LMEAMWTRFL PAIARLRELL AANAIGEVRM IASDFGFRSS VDPRSRLFDP ALGGGSLLDV
GVYPVSLTSM IFGGEPERIA TLAHLGATGV DEEAAMILGY SSGRMAMLWS AIRTETPHET
TIMGTDGMIR VHPQWWRART LTLIRGGRAD EVIEAPYSGN GYQYEAIEAM RCLRAGMTES
PVMPLDETLG IMRTLDAIRA QWGLTYPME
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