Gene Rcas_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3202 
Symbol 
ID5540700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4162643 
End bp4163191 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content62% 
IMG OID640895323 
ProductCheW protein 
Protein accessionYP_001433274 
Protein GI156743145 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.525075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGC ACGATCTTCG AACCTTTCAG TCGAACTCTG AGTGGCGCGC GACTCTGGAA 
GCGCGCGCGC GCGCGTTGGC GACGCAGGAA GTCGTCGAAC GTACTGCCGA CGGCGCGCTT
CTGATCCAGT TTCGACTCGG CGATGGACGT TATGCGCTGC CGGCGCACTA TGCCCGCGAA
ATCCAGCCAC TCAGAGCGTA CACACCCCTC TTCGGCGTGC CGCCGTTTAT CGTCGGTCTG
GTTAACATCC ACGGACGCCT GTACACCTGC ATCGATCTGC GACCGCTGCT CGATCTGCCG
GGCGCTCCTC CGACACCCGG TTCTTTCTTG ATCATCATCC AGGGCAGTGG CGCAGAGGCG
GCGTTGCTGG CGGACAGTGT CGTGGGAATG GTCACCGACG CGCTCGACGC GAGTCCTGCG
CCGGTGATGG CGTCGAGTGC TGCCACTTCC TGGATTCGTG GCGTGGACCG CGATCTGTCT
ATCGTCATCG ATCCTATTGC GCTTCTGACC GATCCCCGCC TGATCGTTGA TCATCAGGCA
GCCGCCTGA
 
Protein sequence
METHDLRTFQ SNSEWRATLE ARARALATQE VVERTADGAL LIQFRLGDGR YALPAHYARE 
IQPLRAYTPL FGVPPFIVGL VNIHGRLYTC IDLRPLLDLP GAPPTPGSFL IIIQGSGAEA
ALLADSVVGM VTDALDASPA PVMASSAATS WIRGVDRDLS IVIDPIALLT DPRLIVDHQA
AA