| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3190 |
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| Symbol | |
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| ID | 5540688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4147824 |
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| End bp | 4149623 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895311 |
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| Product | integral membrane protein MviN |
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| Protein accession | YP_001433262 |
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| Protein GI | 156743133 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
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| TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000159661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0890003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACGGCT GCCAGTTCTC AGTTCTCAGT TCTCGGTTCT CGGTTCTCAG TTCTCGGTTC
TCGGTTCTCG GTTTTCTCAT GAAACGCGCT CTGCTGAACA CTCTTATCGT TGCAACCGGA
TACCTGGCGA GTCGGCTGCT TGGGCTGGCG CGCGATGTGC TGATCTCACA CCAGTTCGGC
ACCAGCGCCG AACTTGCCGC TTTCCGCGCA TCGTTCGGCA TTCTCGACCT GATCTACCTC
GTGGTTGCGG GAGGGGCGTT GGGTTCGGCG TTTATCCCGG TGTTTTCGGA GGCGCTCGAA
CAACGGCGCG ATGCCTGGCG GCTGGCATCT GCCGTGCTGA ACCTGACCCT GTTGGCGCTG
ACGGCAGCAT GTGCGGTCGT CTGGGTGTTT GCCGCGCCGC TTGTGGCGCT GAGCGTTGGG
CGCGGGTTGA ATGAGGCGGA ACGCGCACTT ACGGTCGATG TGCTGCGCCT GATGCTGATT
CAACCATTTC TGCTTGGCGT CGGCGGACTC GCCAAGGCGA CGCTCGAATC GTTCAACCGG
TTTACGCTGC CCGCCATCGG TTCAAATCTG TACAACCTTG GAATCATTGG CGGCGCGCTG
TTCGGACCCT GGCTCGGCAT CTATGGGCTG GTCTGGGGCG TCAATATCGG CGCGGCGCTG
TTTGTTCTGG TCCAGTTGCC AGGGTTGCGC TCCGTCGGGG CGACGTATCG CATCAGAGAC
GATCGTGATG AACAGCGCAG GAAAGCAGGT CTGGTCGTCT CTGCGAACAC TGCCGCCGCA
TATCAGAGCG GGCGCGAGTC TGACGGCGCT CGCGCGTCGC CCGTCTCATT TCTGACCCCA
TTCTACGCCG AAGGCGTTGG ACGGATGCTC CGTCTGCTCG GTCCTCGCAT CTTGGGGCAA
TCTGCATGGC AGGTCAACAT GATCGCTATT GTCAGTCTGG CATCGACGCT GGGGAGTGCG
GCGCTGGCAG CAAATGCGTA TGCGCTCCAG TTGATGCTGC TGCCGCACGG GTTAATCGCG
CTGAGCATGG CAACGGTTCT TTTCCCCGAA ATGGCGCGCC AGTATGCTGC CGGCGACCGC
GTAACGTTTC GTGCAACGGC GCTTGGTGGT GTGCGCGCTG TGCTGTTCCT GGCGCTGCCG
GCTTCGGCGA TCCTTGGCGT GCTGGCGCTG CCGGTGCTCC GCGCGCTCTT TCAGCGCGGC
GCATTCGATA CTGCATCGGC GACGCTGACC ACCGAGGCGC TGGCGGCGTA TGCGCTGGGG
CTTGCCGGAT TTGCCGCCGC CGAAGTCATC GTGCGCGCCT TCTTCGCTAT GCAGGATACC
CGAACGCCGG TGATTGTTGG TATTGCGGCG GTGGCGCTCA ACATGAGCCT GGGATGGTCG
TTCCTGCGTG TGGGGCTGGG GTTGGGCGGG TTGGGTCTGG CGTTCAGCCT GTCAAACCTG
TTTGAAGCCA CTCTGCTCCT CGCGCTGCTT GGACGGCGGT TGGGCGGGCT GGAGCGCGAC
TTCTTCCGCG CAATCGGTGC GATGATCCTG GCGACCATGG CATGCGCCTT CGCGCTTGCA
TTACTACTCC GTTCCTCATA TGCGATAGCA CCCTTCGTCG CTCCTGGTGA TACCTACCGC
TGGCCCGACG ACTTTTTGCC GCTCGTTGTA TGGCTGGCCG GGGCAACCGC AGCCGGCGTC
CTGGCGTATG CCGGGGTCAC TGCTCTGTTC AGGGTATCGG AACTCAGCGC TGCCGTAGCG
CGCGGGCGAC GCATACTGAC GCGGGCTTGG TTCAGGTTTG CTCCTGGGGA TGGGGGGTGA
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| Protein sequence | MNGCQFSVLS SRFSVLSSRF SVLGFLMKRA LLNTLIVATG YLASRLLGLA RDVLISHQFG
TSAELAAFRA SFGILDLIYL VVAGGALGSA FIPVFSEALE QRRDAWRLAS AVLNLTLLAL
TAACAVVWVF AAPLVALSVG RGLNEAERAL TVDVLRLMLI QPFLLGVGGL AKATLESFNR
FTLPAIGSNL YNLGIIGGAL FGPWLGIYGL VWGVNIGAAL FVLVQLPGLR SVGATYRIRD
DRDEQRRKAG LVVSANTAAA YQSGRESDGA RASPVSFLTP FYAEGVGRML RLLGPRILGQ
SAWQVNMIAI VSLASTLGSA ALAANAYALQ LMLLPHGLIA LSMATVLFPE MARQYAAGDR
VTFRATALGG VRAVLFLALP ASAILGVLAL PVLRALFQRG AFDTASATLT TEALAAYALG
LAGFAAAEVI VRAFFAMQDT RTPVIVGIAA VALNMSLGWS FLRVGLGLGG LGLAFSLSNL
FEATLLLALL GRRLGGLERD FFRAIGAMIL ATMACAFALA LLLRSSYAIA PFVAPGDTYR
WPDDFLPLVV WLAGATAAGV LAYAGVTALF RVSELSAAVA RGRRILTRAW FRFAPGDGG
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