Gene Rcas_3166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3166 
Symbol 
ID5540664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4109978 
End bp4110754 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content58% 
IMG OID640895287 
Productelectron transfer flavoprotein alpha/beta-subunit 
Protein accessionYP_001433238 
Protein GI156743109 
COG category[C] Energy production and conversion 
COG ID[COG2086] Electron transfer flavoprotein, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.478956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCG TCGTCTGCAT GAAACAGGTT CCGCGCGATA ACTCGGTCAA GATCAATGCA 
GATCTGACCA TCAACGCCGA TGGGATCGAG CAGATCATGA ACCTCTTCGA TGAGTACGCC
GTCGAAGAGG CGCTGCAATG GAACGAGAAA CTGGGCGGCA AAGTCACCAT TCTCTCGATT
GGACCAGAAG ACTGGAAAGA ACAGATTCGT CGCGCGCTCG CTATGGGCGC AACCGACTCG
CTGCTCTTGA GCGATCCGGC TTTCACCAAC CTCGATACCT TCGGTGCTGC GCGGGTCGCC
GCCGCCGCCA TCAAGAAACT CGGTGACGTC GATCTGGTGC TGTGTGGGCG CAACTCGACC
GATGACGAAA CCGGGGCGTT CGCTCCGGCA CTGGCGCGGT TGCTGGGCTG GACGCAACTG
ACCTACGTGG GCAAGGTGGT TACGCTCGAA AGCGGCAGGA TCGTCGCCGA ACGCCACCTC
GAAGAAGTCG TCGAGACGGT CGAAGCCAGT TTGCCAGCAG TTGTGACGGT CGTCAAAGGT
ATCAATGAAC CACGCTATCC ATCGTTGTTG CGCATCCGCA AGGTCGCCAA AGTCGAGATT
CCGACTTGGT CAGCGGCGGA TGTCGGTCTC AGCGCCGCCG ATCTGACCCC CAGGTTGAAC
CTGGTTAATC GTGTGCCACC ACCGCCGCGA CCCAAGGGTG AGATCATCGA AGGGAAAGAT
GCCACGGAAA AGGTTGCCAG ACTGGTCGAT AAGTTGATGG AAGCACAGGT TATCTGA
 
Protein sequence
MHIVVCMKQV PRDNSVKINA DLTINADGIE QIMNLFDEYA VEEALQWNEK LGGKVTILSI 
GPEDWKEQIR RALAMGATDS LLLSDPAFTN LDTFGAARVA AAAIKKLGDV DLVLCGRNST
DDETGAFAPA LARLLGWTQL TYVGKVVTLE SGRIVAERHL EEVVETVEAS LPAVVTVVKG
INEPRYPSLL RIRKVAKVEI PTWSAADVGL SAADLTPRLN LVNRVPPPPR PKGEIIEGKD
ATEKVARLVD KLMEAQVI