Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3166 |
Symbol | |
ID | 5540664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4109978 |
End bp | 4110754 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640895287 |
Product | electron transfer flavoprotein alpha/beta-subunit |
Protein accession | YP_001433238 |
Protein GI | 156743109 |
COG category | [C] Energy production and conversion |
COG ID | [COG2086] Electron transfer flavoprotein, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.478956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATCG TCGTCTGCAT GAAACAGGTT CCGCGCGATA ACTCGGTCAA GATCAATGCA GATCTGACCA TCAACGCCGA TGGGATCGAG CAGATCATGA ACCTCTTCGA TGAGTACGCC GTCGAAGAGG CGCTGCAATG GAACGAGAAA CTGGGCGGCA AAGTCACCAT TCTCTCGATT GGACCAGAAG ACTGGAAAGA ACAGATTCGT CGCGCGCTCG CTATGGGCGC AACCGACTCG CTGCTCTTGA GCGATCCGGC TTTCACCAAC CTCGATACCT TCGGTGCTGC GCGGGTCGCC GCCGCCGCCA TCAAGAAACT CGGTGACGTC GATCTGGTGC TGTGTGGGCG CAACTCGACC GATGACGAAA CCGGGGCGTT CGCTCCGGCA CTGGCGCGGT TGCTGGGCTG GACGCAACTG ACCTACGTGG GCAAGGTGGT TACGCTCGAA AGCGGCAGGA TCGTCGCCGA ACGCCACCTC GAAGAAGTCG TCGAGACGGT CGAAGCCAGT TTGCCAGCAG TTGTGACGGT CGTCAAAGGT ATCAATGAAC CACGCTATCC ATCGTTGTTG CGCATCCGCA AGGTCGCCAA AGTCGAGATT CCGACTTGGT CAGCGGCGGA TGTCGGTCTC AGCGCCGCCG ATCTGACCCC CAGGTTGAAC CTGGTTAATC GTGTGCCACC ACCGCCGCGA CCCAAGGGTG AGATCATCGA AGGGAAAGAT GCCACGGAAA AGGTTGCCAG ACTGGTCGAT AAGTTGATGG AAGCACAGGT TATCTGA
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Protein sequence | MHIVVCMKQV PRDNSVKINA DLTINADGIE QIMNLFDEYA VEEALQWNEK LGGKVTILSI GPEDWKEQIR RALAMGATDS LLLSDPAFTN LDTFGAARVA AAAIKKLGDV DLVLCGRNST DDETGAFAPA LARLLGWTQL TYVGKVVTLE SGRIVAERHL EEVVETVEAS LPAVVTVVKG INEPRYPSLL RIRKVAKVEI PTWSAADVGL SAADLTPRLN LVNRVPPPPR PKGEIIEGKD ATEKVARLVD KLMEAQVI
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