Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3163 |
Symbol | |
ID | 5540661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4105896 |
End bp | 4106681 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640895284 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001433235 |
Protein GI | 156743106 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.125416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG ACAATATCCT TGTGGCTGTC GAAGGTCCGC TGACGATCAT CACAATCAAC CGTGAACGTG TGCGCAACGC GCTCAATCAG GCGACCATCG CCGAAATCCA GACGGCGTTG CGCGCGTTTG AAGCCGACTT ATCGCAGCGT GTTGCAATCA TCACCGGCGC CGGCGATCGC GCGTTCGCTG CCGGCGCCGA CATTACCGAA ATCCGGGTGT TGCCGGGCGC CGATGCCGCG CGACGGTTCA GCGAAGCCGC TCACGATCTC GGGCTGTTTA TGCACCAGAT GGCCAAACCG ATCATTGCAG CAATCAACGG GTACGCGCTT GGCGGCGGGC TGGAATTGGC GATGAGTTGC GATGTGCGCA TTGCCGCCGA AACTGCTATG TTCGGTCAAC CAGAGATCAA TCTTGGCATC ATCCCCGGTT GGGGCGGCAC GCAGCGCCTG CCGCGCCTGA TTGGTCCATC GGCGGCGCGC CTGCTCTGCA TGACCGGAGA TATGATCACG GCGGCAGAGG CGCTGCGCCT CGGTCTGGTC GAGCGTGTCG TTCCGGCGGC ATCATTAATG GACGAGGCGC GTACACTGGC AATGAAGATC GCCTCAAAAG CGCCGCTGGC GATTGCAGCC ATTAAGCAGG CAGTCAATCG CGGGTTGGAC ATGCCGCTGG CGGAAGGATG CATGTACGAA GCGGCGCTCT TCGGTGCGAT TGCAGCAACC GACGACGCAA AAGAAGGAAC GTCGGCGTTT CTCGAAAAGC GCCAGCCCAC GTGGAAAGGA CAATAG
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Protein sequence | MTDDNILVAV EGPLTIITIN RERVRNALNQ ATIAEIQTAL RAFEADLSQR VAIITGAGDR AFAAGADITE IRVLPGADAA RRFSEAAHDL GLFMHQMAKP IIAAINGYAL GGGLELAMSC DVRIAAETAM FGQPEINLGI IPGWGGTQRL PRLIGPSAAR LLCMTGDMIT AAEALRLGLV ERVVPAASLM DEARTLAMKI ASKAPLAIAA IKQAVNRGLD MPLAEGCMYE AALFGAIAAT DDAKEGTSAF LEKRQPTWKG Q
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