Gene Rcas_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3163 
Symbol 
ID5540661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4105896 
End bp4106681 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content61% 
IMG OID640895284 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001433235 
Protein GI156743106 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.125416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG ACAATATCCT TGTGGCTGTC GAAGGTCCGC TGACGATCAT CACAATCAAC 
CGTGAACGTG TGCGCAACGC GCTCAATCAG GCGACCATCG CCGAAATCCA GACGGCGTTG
CGCGCGTTTG AAGCCGACTT ATCGCAGCGT GTTGCAATCA TCACCGGCGC CGGCGATCGC
GCGTTCGCTG CCGGCGCCGA CATTACCGAA ATCCGGGTGT TGCCGGGCGC CGATGCCGCG
CGACGGTTCA GCGAAGCCGC TCACGATCTC GGGCTGTTTA TGCACCAGAT GGCCAAACCG
ATCATTGCAG CAATCAACGG GTACGCGCTT GGCGGCGGGC TGGAATTGGC GATGAGTTGC
GATGTGCGCA TTGCCGCCGA AACTGCTATG TTCGGTCAAC CAGAGATCAA TCTTGGCATC
ATCCCCGGTT GGGGCGGCAC GCAGCGCCTG CCGCGCCTGA TTGGTCCATC GGCGGCGCGC
CTGCTCTGCA TGACCGGAGA TATGATCACG GCGGCAGAGG CGCTGCGCCT CGGTCTGGTC
GAGCGTGTCG TTCCGGCGGC ATCATTAATG GACGAGGCGC GTACACTGGC AATGAAGATC
GCCTCAAAAG CGCCGCTGGC GATTGCAGCC ATTAAGCAGG CAGTCAATCG CGGGTTGGAC
ATGCCGCTGG CGGAAGGATG CATGTACGAA GCGGCGCTCT TCGGTGCGAT TGCAGCAACC
GACGACGCAA AAGAAGGAAC GTCGGCGTTT CTCGAAAAGC GCCAGCCCAC GTGGAAAGGA
CAATAG
 
Protein sequence
MTDDNILVAV EGPLTIITIN RERVRNALNQ ATIAEIQTAL RAFEADLSQR VAIITGAGDR 
AFAAGADITE IRVLPGADAA RRFSEAAHDL GLFMHQMAKP IIAAINGYAL GGGLELAMSC
DVRIAAETAM FGQPEINLGI IPGWGGTQRL PRLIGPSAAR LLCMTGDMIT AAEALRLGLV
ERVVPAASLM DEARTLAMKI ASKAPLAIAA IKQAVNRGLD MPLAEGCMYE AALFGAIAAT
DDAKEGTSAF LEKRQPTWKG Q