Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3146 |
Symbol | |
ID | 5540644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4077347 |
End bp | 4078123 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640895267 |
Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
Protein accession | YP_001433218 |
Protein GI | 156743089 |
COG category | [C] Energy production and conversion |
COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0114554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGACGAC GAGTCTATGT CTGGGAAGTC CCGGTGCGCC TGACGCATTG GGTCAATGTG TTGAGCATTG TCATGCTCTG CTTCACCGGC TACTACATTG CCAACCCGTA CATTTTCGTG AGCACGCGCG AACCGTGGGG CATCTATTTC ATGGGGTCGA TGCGGTTTCT CCACTTTGTG TTCGCCTACA TCTTCGTGGC GAGCCTGATT CTGCGCACCT ACTGGGCATT TGTCGGCAAT CAGTGGGCGC GCTGGCGTGG CCTGTTTCCC TTCCTGACGA AGGAAGGGCG CACAAATATG TGGCATGCGA TCCAATACTA CTTCTTCCTG CGTCGTAATC CTCCAGAGGT TGCCGGGCAC AATGCGCTGG CAGGCACATC GTACATGATC ATTGTTGTCC TGTACGGTTT GAGCGCTTTT ACCGGTTTTA CGCTCTACGG TCAGTTGCAT CCTGCAAGCA TCTGGTACAC GCTCACCGAC TGGGTGACGA ACCTTGTGTC GCTTCAAACG CTGCGGCTGG GACATCACAT CATTATGTAC CTGATCCTGG CGTTTGTCGT TCACCATGTG TACGCCGCGT GGTTGATCGA CATGGAAGAG GGGAACGGTT TGATGTCGAG CATCTTCAGT GGCTATAAGT TCCTTCCCAG GGAGCAGCAG CCGGACTGGA TCGAGCAGGT GATCGCGCAA AATGGCAAAC AGAACGGCAA AGCGCCGCAG GTAGCGGAGC CGACGACGCA GCAGGTGAAG GTTGCAGGCG GGAAAGTCGA AAGTTGA
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Protein sequence | MRRRVYVWEV PVRLTHWVNV LSIVMLCFTG YYIANPYIFV STREPWGIYF MGSMRFLHFV FAYIFVASLI LRTYWAFVGN QWARWRGLFP FLTKEGRTNM WHAIQYYFFL RRNPPEVAGH NALAGTSYMI IVVLYGLSAF TGFTLYGQLH PASIWYTLTD WVTNLVSLQT LRLGHHIIMY LILAFVVHHV YAAWLIDMEE GNGLMSSIFS GYKFLPREQQ PDWIEQVIAQ NGKQNGKAPQ VAEPTTQQVK VAGGKVES
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