| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3140 |
|---|
| Symbol | |
|---|
| ID | 5540638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 4070829 |
|---|
| End bp | 4071974 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640895261 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001433212 |
|---|
| Protein GI | 156743083 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATAG CACTGATCAC CGAGACCTTT CTGCCCAATG TCAACGGCAT TGTCACGACG
CTGTGCCGCC TGTTGGAGCA CGTGCAGCAC GAAGGACACG AAGCATTGCT GTTCGCGCCG
CAGGGCGCTC CTGAGCACTA CGCTGGCGCA CAGGTCATTC CGCTGCGTGG TATTCCATTC
CCACTCTACC CCGACATCCG CTTTACGCCG CCGCAACCGG GCATCGTGCC GGCACTCCGG
CAGTTCCGCC CCGATCTGAT CCATCTCGCC GGTTTGATGG TTTTGGGTCC GGCGGCGCGT
TTTGCCGCGC AGCAGTTGCG CATCCCGGCA ATCGCCACCT ATCACACCGA TCTGCCTGCG
TACAGTGTTT ACTACGGATT GGGCGCGCTG CGCCTGGCAG CATATTCGTA TTTGCGCTGG
ATTCATAACG CCTGTGCGCT GACTCTGTGC CCATCCTCGG CGATCCTGGC AGATTTGCGC
AAGCGCGGAT TTCGGCGGCT CCGCCTCTGG GGTCGTGGCG TCGATACCAT CAGATTTCAT
CCGGCGCACC GACGCGCGGA GTGGCGCGAT GCTATCGGTG CGCGCGCCAA CGAGTGTGTG
TTACTCTACG TTGGGCGCCT GGCAGCCGAA AAACGGCTCG ATCTACTGGC AGAAGCGTTG
CGCGACATGG AAGGCATTCG TCTGGTGCTG GTCGGCGATG GACCGGCGCG ACAACAGATT
GAACGTCGGT TTGCCGGGAT GCCAGTGACG TTCACCGGCT TTCTTAATGG GCACGATCTG
GCAGTCGCCT ATGCCAGCTC CGATCTGTTC GTCTTCCCTT CCGATACCGA AACATTCGGG
CAGGTAGTTC AGGAGGCAAT GGCATCGGGA CTACCGGTCG TCGCCGCGCG CGCCGGCGGC
GTCATCGATC TGGTGCGAAA TGAAGAAACC GGCGTCTTCT TTGCGCCGGG ATCGGCATAC
AGTTTGCGTA CTGCCGTCAA CCGCCTGGTT GCCAACCCCG GTCTGAGCAG GGCGTATGGT
CAGGCAGGGC GCGCCGCAGC CGAGCGGCGA TCCTGGACCC GGGTGCTCGA TGAACTCATG
GAATACTATC GGCGTGCATT GCGCTGGCGT CCACGCCTGC TGGCACTCAG GAGAACCTGG
TCATGA
|
|---|
| Protein sequence | MRIALITETF LPNVNGIVTT LCRLLEHVQH EGHEALLFAP QGAPEHYAGA QVIPLRGIPF
PLYPDIRFTP PQPGIVPALR QFRPDLIHLA GLMVLGPAAR FAAQQLRIPA IATYHTDLPA
YSVYYGLGAL RLAAYSYLRW IHNACALTLC PSSAILADLR KRGFRRLRLW GRGVDTIRFH
PAHRRAEWRD AIGARANECV LLYVGRLAAE KRLDLLAEAL RDMEGIRLVL VGDGPARQQI
ERRFAGMPVT FTGFLNGHDL AVAYASSDLF VFPSDTETFG QVVQEAMASG LPVVAARAGG
VIDLVRNEET GVFFAPGSAY SLRTAVNRLV ANPGLSRAYG QAGRAAAERR SWTRVLDELM
EYYRRALRWR PRLLALRRTW S
|
|---|
| |