Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3137 |
Symbol | |
ID | 5540635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4068588 |
End bp | 4068971 |
Gene Length | 384 bp |
Protein Length | 127 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640895258 |
Product | large conductance mechanosensitive channel protein |
Protein accession | YP_001433209 |
Protein GI | 156743080 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGAGG GCTTCAGAAA GTTCGTCATG CGCGGCAACG TCGTCGATCT GGCGGTCGGC GTGGTGATCG GCACCGCGTT TAGCGCCGTG GTTAATTCAC TGGTCAATGA TGTCCTGCTG GCAGCCATCG CCACGCTGGT GGGAAAGCCA GATTTTTCAG GTGTTCTGGT CTTTGGAGCA GTACGGATTG GCGCCTTTCT CACGGCGGTC GTCAACTTCC TGCTCATCGC CGCTGCCGTC TACTTCTTTG TAGTGACGCC GGTCAACAAA CTCAACGATC TGATCAGGAA ACCTGAACCG CCTGCACCAC CAGAGCCTTC CACACAGGAG AAACTCCTGA TCGAAATTCG CGATCTCTTG CGACAAAACA TAACCCGCTC TTAA
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Protein sequence | MFEGFRKFVM RGNVVDLAVG VVIGTAFSAV VNSLVNDVLL AAIATLVGKP DFSGVLVFGA VRIGAFLTAV VNFLLIAAAV YFFVVTPVNK LNDLIRKPEP PAPPEPSTQE KLLIEIRDLL RQNITRS
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