| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3127 |
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| Symbol | |
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| ID | 5540623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4051827 |
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| End bp | 4053581 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640895246 |
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| Product | ABC transporter related |
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| Protein accession | YP_001433199 |
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| Protein GI | 156743070 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACT CTGGACTCCG CTTTCTGCTC CCGTACATGG CGCCATATCG GCGACACCTG
ATCGTGGGAA CCATCTATGC GCTGATCAGC GCATCCGCCA GCGCGTTCAG TCCGGCGCTG
CTCGGACGCG CAATTGACGA TGTGCTGGCT GGAATCCGCA CGGATCGACT GGTATGGTAT
GCGGTTGGCC TCATTGCACT GGCAACGACG CTTGCGGTGT TCAGGTATCT GCTCCGTATG
CTGACCGGAT GGATTGCAGT AGGGGTCAGT TATCGCATGA GCCAGGACTT GTTCGATCGG
GTGTTGTTGT TCGATCAGGC GACGGCGCAA AGTTATGGTG TGGGTGATCT GCTCTCACGC
GCCTCGAACG ATTTCATTTA CATCTGGCGC TTCTACAGCG CAGGCTTTCA GATGTCGATG
CATGCGCTGT TTCTGCTGGC GATTGGAACG GTGCTCATGG CGTTGAGCAG TCCGCTGCTG
GCGGCGCTGG TCGTCGCATT GTTGTTTGCC AGTCTCGGTG TGCAGGTTGG GCTGGGGCGC
GTGTTGGAAC GCGCATTCGA TCATGTGCAG CAGCGTATGG CGCGCCTCTC GGCATTTGCT
CAAGAGCATC TGAGCGCCAT GCGCATGCTG GCGGCGTATG CGCAGGAACG CTCCGTAGTT
GCAGCGTTTC AGCAGAGCAA TGAGGCGTAT GTGCGCAGTA ATCTTGATTT TGTGCTGCGT
TCCGCAGCCA TTGCTCCCCT CCCCAGTCTG GTGGTGCGTC TGGCGGCTGC GGTTGTGCTT
GGTTTGGGTG GCGCACTGGT AGTTGGAGGA GCGATTTCGG TCGGCCAGTA TGTGCAGTTC
ATCGTTTATC TGGGTTTGCT CAGCGCGGCA GCGCAACAAC TCAGCCAGGC GTATGAGCGA
CTGCAACAGG GAAGCGCCGC TGCCGGACGA ATCGGCGAAG TCTTGCGCCG TCGTTCGCGT
ATTGTTGATG CTCCTGACGC TATTGCGCTC ATGCCGTCTG GCGATATTTG CTTCGAGGGG
GTTGGCGTGC GCGCCACCGG CGACTCTCGC TGGATTGTGC GCGGCATCGA TCTGCGGATA
GCGGCAGGAA CGACGCTTGG TATCGTTGGG GCGACAGGAG CGGGGAAAAG TACGCTGCTG
AGTCTCATCG GGCGTGTGCG CGACCCCGAT GAAGGGCGCA TCACGATTGG CGGGGTCGAT
ATCCGGCGCA TCCGGTTGGA AACATTGCGT CGCTCTGTGG TGTATGTGCC GCAGGAGCCG
TTGCTGTTCA GCATATCGGT GCGCGACAAC ATCGCTCTTG GCTTAACCGG CGTTCCCGAT
GAACTGGTGC ATCGCGCCGC CCACGCTGCG CGCCTGACAA ATGATCTGGC GCAGTTACCG
CAAGGGCTGG CGACCATTGT TGGAGAGCGC GGCGCGACGC TCTCTGGCGG GCAGAAGCAG
CGCACTGCTA TTGCGCGTGC GCTGGTGCGC GATCCGTCGA TCTTGCTGCT CGACGACACG
CTTTCGAGCG TCGATGCGCA GACGGCAGCC GAGATTCTGC GCGAACTTGC CGCAGCGCGC
GAAGGTCGCA CCGTAGTGAT GGTCAGTCAG CGGATGGCAG CAGTGCGCGA TGCCGATCAG
ATCATCGTTC TGCACGAGGG AGGCATTGTG GAGCAGGGCG ATCATCAGTC GCTGCTGGCG
CTCAATGGAC GCTATGCCGC GATGTATCGT CGTGAATTGC GGCAGGCGGA AGAGTCCGAG
GAGTCGATCG CATGA
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| Protein sequence | MKHSGLRFLL PYMAPYRRHL IVGTIYALIS ASASAFSPAL LGRAIDDVLA GIRTDRLVWY
AVGLIALATT LAVFRYLLRM LTGWIAVGVS YRMSQDLFDR VLLFDQATAQ SYGVGDLLSR
ASNDFIYIWR FYSAGFQMSM HALFLLAIGT VLMALSSPLL AALVVALLFA SLGVQVGLGR
VLERAFDHVQ QRMARLSAFA QEHLSAMRML AAYAQERSVV AAFQQSNEAY VRSNLDFVLR
SAAIAPLPSL VVRLAAAVVL GLGGALVVGG AISVGQYVQF IVYLGLLSAA AQQLSQAYER
LQQGSAAAGR IGEVLRRRSR IVDAPDAIAL MPSGDICFEG VGVRATGDSR WIVRGIDLRI
AAGTTLGIVG ATGAGKSTLL SLIGRVRDPD EGRITIGGVD IRRIRLETLR RSVVYVPQEP
LLFSISVRDN IALGLTGVPD ELVHRAAHAA RLTNDLAQLP QGLATIVGER GATLSGGQKQ
RTAIARALVR DPSILLLDDT LSSVDAQTAA EILRELAAAR EGRTVVMVSQ RMAAVRDADQ
IIVLHEGGIV EQGDHQSLLA LNGRYAAMYR RELRQAEESE ESIA
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