Gene Rcas_3124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3124 
Symbol 
ID5540620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4045516 
End bp4046361 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content62% 
IMG OID640895243 
Productalpha/beta hydrolase fold 
Protein accessionYP_001433196 
Protein GI156743067 
COG category[R] General function prediction only 
COG ID[COG1647] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCG AATCGATCCA ATTTGCTGCG CGTGCGACAG AATCACCATC GGTTGGACGT 
CGCAGGGTGG AGTCGCTGAC TGTTTGGGCG GGTTCGCCGG GTGTATTGTT GATCCATGGC
TTTGGCGGCG ATCTGGCGGA AGTCCGTCCA CTGGCGGCTG CATTCATTCG GGAGGGATAC
AGCGTGCACG CCCCGCTGCT CCCTGGTCAT GGCGCGCTTC CCGATGCGCT TGCCGGTGTC
CGGTGGCAAC AATGGGCGGA AACAGTGGTG CAGGGATTTG CGCTGCTGCA TCAGCATTGC
TCCGAGGTTG CGGTCGTTGG CTTTTCGATG GGATCGTTGC TCGCGCTGCT GCTGGCGGCA
CATCTGCCGG TTGCGCGCCT GGTCGCGCTG GCGCCGGCGT TGACGCTGCG CGGCCAATTT
CTGGTGAATC TGAGCAGTAT CGCGCGATAC GCCATTTCAT GGTACTATCC TCTTGCCAGG
GCTGATTTCA AAGATCCGGC GCTGCGCGCG CTTATACGCA ATCGCGTCCC GGATGCCGAT
CTTGATGACC CGGTCGTCTG TGAGCAATTG CGCCGCACTG TGCGCATGCC GCTGACTGCG
ATTCATCAGT TGACCCTGTT GCAGCGCTCT GCGCGCCGTG CATTGCCGCG CATCACGGCG
CCAACGCTGG TAGTGCAGGG GCGCGATGAT GCAACAGTCG ATCCACGATC CGCCGGGCAG
GTCGCGCGGC ATATCGGTGC TGCCGACTGT CGGTTGATTT GGATGGATGG GTATGGACAT
CAGTTGCTCC TCGGCGAGGG TGGTGAACGG GTCGCGCATA TGATCGTCGC CTGGCTCAAA
GGGTAG
 
Protein sequence
MPTESIQFAA RATESPSVGR RRVESLTVWA GSPGVLLIHG FGGDLAEVRP LAAAFIREGY 
SVHAPLLPGH GALPDALAGV RWQQWAETVV QGFALLHQHC SEVAVVGFSM GSLLALLLAA
HLPVARLVAL APALTLRGQF LVNLSSIARY AISWYYPLAR ADFKDPALRA LIRNRVPDAD
LDDPVVCEQL RRTVRMPLTA IHQLTLLQRS ARRALPRITA PTLVVQGRDD ATVDPRSAGQ
VARHIGAADC RLIWMDGYGH QLLLGEGGER VAHMIVAWLK G