Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3121 |
Symbol | |
ID | 5540617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 4040313 |
End bp | 4042691 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640895240 |
Product | hypothetical protein |
Protein accession | YP_001433193 |
Protein GI | 156743064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCATC AGCGCACGAC CCGACGCAAA ACGATTGTCA CCCTCATACT CGTGGGAATG CTCGCCGCTC TTGTCGTGAG CATTCCTCTG ACTATCGTTC AGGCGCAGCA GGTCGTTCAG ATCACACAGG TCGGCGCGCC GCCGTCGGGC GACCCTGGAA CCATTATCAC TCTGACGTTC CAGTTGACGA ATAATATCAA TGATGCTACG GCTGCCAGCC CAACGACGAC GTTCAACATT ACGACCTCAA ATGTACCATC CGGTATCACT GTCAGTGCAC CGGGTCCGGT GCAACTGCCA AACAACTCGC CTGGCGTCAA TGCCAATTTC ACGTTGCAAC TGAGCATCGG CGGAAATGTC GTGCCAGGCA CCTATAATAA TCTGCTGGTT ACGGTTACCG GATCGTACAA CTCGACATCG GGGGTGCGCA CTGTGTCCGC CAGCACTTTC GGCGTGTTCG TTGTGACCGT TGGCGGGCAG ACCGCCACGC CAACCCTGTC GCCGACAGTG ACGCCGACGC CGACGCGCAC ACCGGGACCA ACGCCAACTC CCGGTCCGAC GTGTCCTGAA GGCGCCCGCG ATCCGGGAAA CGATCCTGGC AGCGCGCGGC TGGTGCTGAT CGACTCACCG GTGACACACG GCATCTGCGA GATCGGCGAT GAGGACTGGT TCCGCTTTGG CGGCGTCGGC GGCAAGGTTT ACACGATTGA TATCGAACGC ATGGACGCCG GGCTTGATCT GTCGCTCGAA TTGTACGATG AGAATGGTCA GCGATTGGCG TTCAATGATG ATTTCTTCAA CCGTAATCCG GCGAGTCCCG ACCCAAAGGA TATCAAGCCG CGCATTCAAT CGTGGCGCGC GCCGCGCGAT GGCTTCTACT ATGTGCGCGT CCGCGATACG CTCAGTATTG GCGGCGGCAA CCGCACCTAT GTTTTCGTCG TGCGTTCCGA AAGTTACGGA CCGACGGCTG CGCTGGTCGG CGAGATCTGC CGCGACCTGT ATGAAGACGA CGGTTTGCCG GAGCAGGCGA CACTCATCTT GCCGAACGAA ATTCAGCCGG GTCGGCGGCT CTGCCCGACG GGGGACGCCG ATTGGGTAAA GTTCTTCGGC AAAGCGGGCA AAGTCTACTA TATCTACACC GACACGCGCC CATACCGCAA CACCCCCGAC TTCAACAATC AAACGCAGGC AGGCGCCGAC ACGGTGATGT ATTTGTTCGA CCGCGACGGT ATTCGCCTGC TTGATTTCAG CGACGATATT GCCGGATCGC TCGACTCGCA AATCCGCTTC ATACCCCGGG TGGATGGTTT CTACTATGTA CAGATCAAGA ACAACGGCGA CCTTGGCAAC CAGTTCATTC GCTACGACCT GATCCTACAG TTGTGCGTTC CAGACGAGGA GTGTGGACGC GCGCCGCAAC CGGCAGTGGC GCCAACCCCC GCAGGACCGA CACCGACCGT CGTGCCATTT GATGATCGCA CGCCAACGCC AACCGGTACA CCGCCACCGG GCGCCTCGGT TGGCACTGAA TCCGGCGACG CTCAGGACGG AACAGCACGC GCATTTGTCA ATGGTCCACT GGTTGGGTTT GCCGATGTGG CATTCGACCA ACTCTGGCAA CGCACCGATC GGGTGATCGC CAGCGGCAGA GTGCAGCGCA GCTGGATGTG GGGACCACGC GGACTGATGG CGCGCGCCGA GAGTTATCAG CAGGCGATCA GCGGCATGCG GCAGGTGCAG TACTTCGACA AGGGTCGAAT GGAACTGAAC AACCCCTTTG GTGATCGTTC AAACCCCTGG TTCGTCACCT CTGGTCTGCT GGTGATGGAA CTGGTTACCG GGCGCATGCA GGTTGGAGAT GCCGAATTCG TGCAGCGCGA AGCGGCCTCT ATCCCTGTCG CCGGCGACGC CGATGATCCC AACGCGCCGT TCTATGCCAG TTTCGCGCTT GCCATCACAC GAGCGGAACC GGATCAGACT GGACAGTTGC CGCGGATGAC CATTGATCGG CAGGGACGCA TTGGCGCATA TGAAGGACCG ACGCGCGCTG AGACGCGGAT TGCGCACTAT GTACCCGAAA GCGGGCACAA CATTCCAGCG GTTTTTTGGG AGTATCTCAA TGCGCGCGGG CTGATCTACG AACATGGACG TTTACGCAAT GATCGCTTGT TCGACTGGCT GTTTACGCTT GGCTATCCGA TCAGCGAACC GTTCTGGGTG CGTGTGCGTC TTGGCGGGGT CGAGCATGAT GTGCTGATTC AGTTGTTCGA GCGTCGCACA TTGACCTATG TGCCCGATAA TCCACCCGGG TGGCGCGTCG AGATGGGTAA TGTCGGGCGA CATTACTACC GCTGGCGTTA CGGCGAAGAC CTTCCATAA
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Protein sequence | MSHQRTTRRK TIVTLILVGM LAALVVSIPL TIVQAQQVVQ ITQVGAPPSG DPGTIITLTF QLTNNINDAT AASPTTTFNI TTSNVPSGIT VSAPGPVQLP NNSPGVNANF TLQLSIGGNV VPGTYNNLLV TVTGSYNSTS GVRTVSASTF GVFVVTVGGQ TATPTLSPTV TPTPTRTPGP TPTPGPTCPE GARDPGNDPG SARLVLIDSP VTHGICEIGD EDWFRFGGVG GKVYTIDIER MDAGLDLSLE LYDENGQRLA FNDDFFNRNP ASPDPKDIKP RIQSWRAPRD GFYYVRVRDT LSIGGGNRTY VFVVRSESYG PTAALVGEIC RDLYEDDGLP EQATLILPNE IQPGRRLCPT GDADWVKFFG KAGKVYYIYT DTRPYRNTPD FNNQTQAGAD TVMYLFDRDG IRLLDFSDDI AGSLDSQIRF IPRVDGFYYV QIKNNGDLGN QFIRYDLILQ LCVPDEECGR APQPAVAPTP AGPTPTVVPF DDRTPTPTGT PPPGASVGTE SGDAQDGTAR AFVNGPLVGF ADVAFDQLWQ RTDRVIASGR VQRSWMWGPR GLMARAESYQ QAISGMRQVQ YFDKGRMELN NPFGDRSNPW FVTSGLLVME LVTGRMQVGD AEFVQREAAS IPVAGDADDP NAPFYASFAL AITRAEPDQT GQLPRMTIDR QGRIGAYEGP TRAETRIAHY VPESGHNIPA VFWEYLNARG LIYEHGRLRN DRLFDWLFTL GYPISEPFWV RVRLGGVEHD VLIQLFERRT LTYVPDNPPG WRVEMGNVGR HYYRWRYGED LP
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