| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3120 |
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| Symbol | |
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| ID | 5540616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4038966 |
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| End bp | 4040117 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640895239 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_001433192 |
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| Protein GI | 156743063 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCTC TCGAACTCGC TATCGCCGTG CGACCGCGCC TGCACCTGGC GCTGCCGCAG
AAGAATCATC GTCTGTCGTC CATCGATCAA CTATTATCGC TGGCAAAGGA GAATGTCTCT
ATGATCGTCG TCATGCGCAG CAACGCAACC GAAGAGGAAC TGAACGCCGT TCTGACGCGC
ATTCAGGAGC ATGGGCTTAA AGGGCGCGTC ACCTATGGCG AAGAGCGGAA CATCGTTGGC
GTCATCGGCG CTGCCATTCC ACCGACGCTG CGGGAAGAAC TCGAGCGGTT CCCCGGCGTC
CAGGAAGCGG TGCGCATCAC CCGCCCCTAT AAACTTGCCG CGCGCGAGTT TCATCCCCAC
GACACGATCG TGCAAGTCGG CGATCTGGTG ATCGGCGGCG GTTCGTTTAT CGTGATCGCC
GGACCGTGCG CCGTCGAGAG CGAAGAGCAG ATTATGACGA CTGCGTTCGC CGTGCGCGAA
GCAGGCGCGC ATATGCTGCG CGGCGGCGCG TTTAAGCCGC GTTCGTCGCC GTACACCTTC
CGCGGATTAG GAGAGGAAGG GTTGCGTCTG CTGGCGCAGG CGCGCGCCGA GACCGGTCTG
CCGATCGTCA CCGAGGTGAT GACGCCAACC GACGTTGAGT TGGTGGCGCG CTACGCCGAT
GTGTTGCAGA TCGGCGCGCG CAATATGCAG AACTTCCAGT TGCTGGAGGA AGTCGGGCGC
AGTGGCAAAC CGGCGCTGCT CAAGCGCGGT ATGTCGGCGA CGATCGAGGA ATGGCTGCTC
TCCGCCGAGT ATATCATTGC CCAGGGCAAC CCGAATGTCA TCCTGTGCGA ACGCGGCATT
CGCACCTTCG AGACGGCGAC ACGCAACACG ATGGACCTGA ATGCGGTGGC GCTCGCTAAA
CGCCGGAGCC ATCTGCCGGT GATCGCCGAT CCATCGCACG GCACCGGCAA ATGGTACCTG
GCGCCGCCGC TGGCTCTGGC GTCGCTGGCA GCCGGCGCCG ACGGCGTGAT GCTCGAAGTG
CATCCCGACC CGGATCGGGC GACGTCGGAC GGCGGGCAAT CGTTGACCTG CGAAAACTTC
GCCGCGCTGA TGCCGCAAAT GACGGCGCTG GCAAACGTGC TGGGGCGGCG CGATGCGCGG
TGGCGGCGAT GA
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| Protein sequence | MTALELAIAV RPRLHLALPQ KNHRLSSIDQ LLSLAKENVS MIVVMRSNAT EEELNAVLTR
IQEHGLKGRV TYGEERNIVG VIGAAIPPTL REELERFPGV QEAVRITRPY KLAAREFHPH
DTIVQVGDLV IGGGSFIVIA GPCAVESEEQ IMTTAFAVRE AGAHMLRGGA FKPRSSPYTF
RGLGEEGLRL LAQARAETGL PIVTEVMTPT DVELVARYAD VLQIGARNMQ NFQLLEEVGR
SGKPALLKRG MSATIEEWLL SAEYIIAQGN PNVILCERGI RTFETATRNT MDLNAVALAK
RRSHLPVIAD PSHGTGKWYL APPLALASLA AGADGVMLEV HPDPDRATSD GGQSLTCENF
AALMPQMTAL ANVLGRRDAR WRR
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