Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_3112 |
Symbol | |
ID | 5540608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 4031115 |
End bp | 4031594 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640895231 |
Product | blue (type1) copper domain-containing protein |
Protein accession | YP_001433184 |
Protein GI | 156743055 |
COG category | [C] Energy production and conversion |
COG ID | [COG3241] Azurin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGC ACAAGTCCTT GTGGGTGCTG ATGGTTGCCG TCGTTTCTGC ATTTGCGCTG GCTGCGTGCG GCGGCGGCGG TGGCGGTGGT GGCGGTGGCG GCGGCGCGAG CACAACGATC GAGATCGCGT CCGATGGCGA GAACCTGGCA TACGATAAGA AAGAGTTCAC GGTACCCACC GGTCAGACGA TCACCGTGAC GTTTAAGAAT ACGTCAACGG CGCAGCAACA CAATATCGTG ATTGTCAAAG GTGGTGAGGA TGTCGCCGCG AAAGTCGATG AAGAGGCGAT TAACGCCGGT CCTCCCGATT TCCTGCCAGC CGATCGGACG AACATCATCG CCGCTACGAA GATGCTCGGT CCTGGCGGCA GTGAGACGAT TACCTTCACA GCGCCCGCTC CCGGGACGTA TGTGTTCCTC TGCACTTACC CGGCGCACTA TGCTGGCGGT ATGAAAGGCG TGATGACGGT CGCGCCGTGA
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Protein sequence | MKMHKSLWVL MVAVVSAFAL AACGGGGGGG GGGGGASTTI EIASDGENLA YDKKEFTVPT GQTITVTFKN TSTAQQHNIV IVKGGEDVAA KVDEEAINAG PPDFLPADRT NIIAATKMLG PGGSETITFT APAPGTYVFL CTYPAHYAGG MKGVMTVAP
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