Gene Rcas_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_3112 
Symbol 
ID5540608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp4031115 
End bp4031594 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content59% 
IMG OID640895231 
Productblue (type1) copper domain-containing protein 
Protein accessionYP_001433184 
Protein GI156743055 
COG category[C] Energy production and conversion 
COG ID[COG3241] Azurin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGC ACAAGTCCTT GTGGGTGCTG ATGGTTGCCG TCGTTTCTGC ATTTGCGCTG 
GCTGCGTGCG GCGGCGGCGG TGGCGGTGGT GGCGGTGGCG GCGGCGCGAG CACAACGATC
GAGATCGCGT CCGATGGCGA GAACCTGGCA TACGATAAGA AAGAGTTCAC GGTACCCACC
GGTCAGACGA TCACCGTGAC GTTTAAGAAT ACGTCAACGG CGCAGCAACA CAATATCGTG
ATTGTCAAAG GTGGTGAGGA TGTCGCCGCG AAAGTCGATG AAGAGGCGAT TAACGCCGGT
CCTCCCGATT TCCTGCCAGC CGATCGGACG AACATCATCG CCGCTACGAA GATGCTCGGT
CCTGGCGGCA GTGAGACGAT TACCTTCACA GCGCCCGCTC CCGGGACGTA TGTGTTCCTC
TGCACTTACC CGGCGCACTA TGCTGGCGGT ATGAAAGGCG TGATGACGGT CGCGCCGTGA
 
Protein sequence
MKMHKSLWVL MVAVVSAFAL AACGGGGGGG GGGGGASTTI EIASDGENLA YDKKEFTVPT 
GQTITVTFKN TSTAQQHNIV IVKGGEDVAA KVDEEAINAG PPDFLPADRT NIIAATKMLG
PGGSETITFT APAPGTYVFL CTYPAHYAGG MKGVMTVAP