| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3105 |
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| Symbol | |
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| ID | 5540601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4023107 |
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| End bp | 4024372 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640895224 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001433177 |
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| Protein GI | 156743048 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.359614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGC GATTCTTCTG GTTCTGCGTG ACGCTGATCG GGTATGTCTA TGCCGGCTAT
CCGGCGCTGT TGACCGTACT GGCGCGGTTG CGTCCGCAAC CGTTGTTTGC GCCGCCTGCC
GATCTGCCGA TAGTGACGCT CCTGATCGCG GCATACAATG AGCAAAACGT GATTGCTGCC
AAACTGAGCA ATAGTCTGGC GCTCGATTAT CCGCGCGACA GGCTCCAGAT TCTGGTGGCT
GCCGATGGGT CGGATGATGC CACGCCCGAC ATTGTCGCCG ATTTTGCCGA TTGTGGCGTC
GAATTGAGTT ATCGCCCCGA GCGCGCCGGG AAACTGGCGG CGATCACCCG TGCGCTCGCG
CTGGCGCGTG GTGAGATTAT CGTGTTGTCC GATGCGAATA ACCTGTACGA CGCAGGCGCA
TTGCGGGCGC TGGTCGCGCC ATTTGCCGAT CCGAGCGTCG GAGCGACGAC AGGCGCCAAA
GTGATTGCGA AGGGCGACGG AGCGCTTGGT GACTCGGAAG GGTTGTACTG GAAGTACGAG
TCGTACATCA AGCGCCAGGA GACGCGACTG AGCAGTTGCA CCGGCGCAGT TGGCGAAATT
ATGGCGGTGC GACGCGGGTT GCTCGATCAG CCGTTGCTGC CGGAGGCGCG GTTGATGGCA
GACGATCTGG CGCTCGCCAT GCATGTGCTG AAACAGGGGT ATCGCGTGGT ATACATACCC
AACGCGCGCT CAATCGAGCG GGTATCTGCT TCGGCGCAGG ACGAGCAGGA GCGTCGGGCG
CGAATTGTGG CGCAGCGTTT TGTGCTGATG CGGCACTCGC ACAGGATGTT GCCGCTGTTG
AATCCGCTGC TCGTCTGGCA GATTGTGTCG CATAAGTACC TGCGCCCGTT TGTGCCGCTG
GCGATGATCG GCGCGCTGCT TGCCAATCTG GCGGCGGTGA TTCGTCCGGC GGCGCAGGGG
GGGATGCTGC GGCTGGCGTC CCCCTTCAAC TGGGTGATGC TGGCGTTGCA GGCAGTGTTC
TATGCGCTGG CATGGATGGG AGGGCGCAAC GAATGTCGCG GCATATGGGG AAAAGCGCTG
TATATTCCGG CGTTCCTGGT GAATGGCAAT CGCGCGGCGC TCGTGGGACT GTACCGTTTT
CTGACCGGGC GCCATACCTC GCTTTGGAAT CGTGTTCAGC GGCGTGAACG TGAAAGCAGC
GCATCTGAGC AGCGCCGTGT CAACCCGTCG TACCGTGTAC TATCGGGAAA GGAAAACAAT
CCATGA
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| Protein sequence | MSGRFFWFCV TLIGYVYAGY PALLTVLARL RPQPLFAPPA DLPIVTLLIA AYNEQNVIAA
KLSNSLALDY PRDRLQILVA ADGSDDATPD IVADFADCGV ELSYRPERAG KLAAITRALA
LARGEIIVLS DANNLYDAGA LRALVAPFAD PSVGATTGAK VIAKGDGALG DSEGLYWKYE
SYIKRQETRL SSCTGAVGEI MAVRRGLLDQ PLLPEARLMA DDLALAMHVL KQGYRVVYIP
NARSIERVSA SAQDEQERRA RIVAQRFVLM RHSHRMLPLL NPLLVWQIVS HKYLRPFVPL
AMIGALLANL AAVIRPAAQG GMLRLASPFN WVMLALQAVF YALAWMGGRN ECRGIWGKAL
YIPAFLVNGN RAALVGLYRF LTGRHTSLWN RVQRRERESS ASEQRRVNPS YRVLSGKENN
P
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