| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3101 |
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| Symbol | |
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| ID | 5540597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 4018357 |
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| End bp | 4019826 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640895220 |
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| Product | polysaccharide biosynthesis protein |
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| Protein accession | YP_001433173 |
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| Protein GI | 156743044 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0405344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAATCAA CGACAACATC GCAATCCGAA GGAGTCGGCA AGCGCGCCGT GCGTGGAACG
TTCTGGTCAT TCCTTTCGTA CACGAGCGGG CGCCTCGTCA CGTTTGTCAC TACGCTGATC
CTGGCGCGTC TGCTGGCGCC GGCGGAGTTC GGCGTGATCG CTTACTGCAC ACTGGTGATC
GCCTATCTCG ACCTGCTTAA TAATTTTGGC GTCGGGCATG CCCTGATTGC GCGACGTGAC
AGGTTGGAAG AAGCCCAGAA TGCGGCATTC GTCGTCAGTA TTGGCAGTAG CGTGTTTCTG
TACGCCGGCG CGTGGATTGC GGCGCCCTCG ATTGCAGTGT TCTTCAATGA GCCGCAGGTA
ACGCCGTTGC TGCGCGTGTT GTCGCTTGGG CTGCTGCTGG TCGGAATCGG CACTGTGCCG
ATGGCTATGC TTCAGCGCGA TCTCCGGTTC AAGGCGTATT TACTTCCCGG GATTGTGCGG
AATATTATCA AAGCAGTGGT TGCCATCAGC ATGGCGTGGC AAGGGTTTGG CGTCTGGAGT
CTGGTGGTTT CAGAACTGGT CAACAAGGTG TTGGAGGTGA TCATTCCCTG GCTGATTGTG
CGCTGGCGAC CAACGCGTGC GTTCGACCCG CAGGTGATGC GCGAGATGTT GGGGTATGGC
GTCCACATTA TGGGGGTCAG TCTGGTTGGC TCCTTTATGG TCAATGTGGA TTATCTGCTG
GTCGGGCGGT TGCTTGGCGC GGCGGCGCTG GGGTACTATA CAATGGCGTT CCGCATTCCC
GAACTGGTCA TTCGCAGCGT CAGTCAGATC GTCAGCACCG TCGCCTTTCC TGTTCTGGCG
CATACCCAAT CGGATCCGGC AAAGACGCAC GACATGTATT TCGCCTATCT GCGCTATATG
GCGCTGGTGA CCTTTCCCGC AGGCGTTGGG CTGGCGCTGT TGTCGCCGGC GCTGGTGCGG
GTCTTTTTTG CCGAGGTATG GCGTCCGATG ACGGCGCCAA TGCAGTTCAT CGCCATCGCC
AGCGCCTTTT CCATCGTGTC GTATCTGTCG GGGATCATTT ACAATGCGAT TGGGCGGCCT
GATCTGACTT TTAAATTGTC GCTGGCGAAA CTGCCGATTG TTGTGCTGGT GCTCTCCATC
GGCACGTTCT GGAATATTAC GGGCGTGGCT GCCGGACATG TCGCGCTGAC GCTGGTGTGT
ATGGCGCTCG ATTTGGTGAT GATCCGACGG GTGACCGGTG TGCGACTGAT GGGCGTGTGG
CATGCGGTGC AACCAGCGTT GTTGGGCGCA GGGGTGATGG CAGCCGTTGT TGGTGCGCTC
GACGCGATGC TGACGGGTGC GCCCATCGTG CAATTGGCGG CGCTGCCACC GATAGGCGCC
CTGGTCTATC TCGGAACTAT CTGGATCGCC GGACGTGAGA TGTTTCTGGA GGCGCGCTCG
GTGCTGCGCG GTAGTCTGGC GCGCGGTTGA
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| Protein sequence | MQSTTTSQSE GVGKRAVRGT FWSFLSYTSG RLVTFVTTLI LARLLAPAEF GVIAYCTLVI
AYLDLLNNFG VGHALIARRD RLEEAQNAAF VVSIGSSVFL YAGAWIAAPS IAVFFNEPQV
TPLLRVLSLG LLLVGIGTVP MAMLQRDLRF KAYLLPGIVR NIIKAVVAIS MAWQGFGVWS
LVVSELVNKV LEVIIPWLIV RWRPTRAFDP QVMREMLGYG VHIMGVSLVG SFMVNVDYLL
VGRLLGAAAL GYYTMAFRIP ELVIRSVSQI VSTVAFPVLA HTQSDPAKTH DMYFAYLRYM
ALVTFPAGVG LALLSPALVR VFFAEVWRPM TAPMQFIAIA SAFSIVSYLS GIIYNAIGRP
DLTFKLSLAK LPIVVLVLSI GTFWNITGVA AGHVALTLVC MALDLVMIRR VTGVRLMGVW
HAVQPALLGA GVMAAVVGAL DAMLTGAPIV QLAALPPIGA LVYLGTIWIA GREMFLEARS
VLRGSLARG
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