| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3078 |
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| Symbol | |
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| ID | 5540574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 3985773 |
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| End bp | 3986651 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640895197 |
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| Product | protein tyrosine phosphatase |
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| Protein accession | YP_001433150 |
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| Protein GI | 156743021 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATGAGC CGCTCATTCT GATCGTCGGC GCTGCCGACA CCGGGCGCGC GCCGCTTGCC
GCCGCGCTGC TGCGCCGCCA TTTGATGAAC CACAGCATTC CTGCGCGGGT CGAGTCTGCC
GGAGTGCTCG GGCACGACGA TGACCCCGCC AGCCCGGATG CACTCACTGT TGCGGAGCAC
ATGGCGCTCG ATCTCAGTGC GCATCGCGCG CGCAGTTTGA GCGACCATCT GGTCGAGGAG
GCGATTCTGC TGCTGGCTAT CGATAGCGGC GCCGCTCGTG TGGCGCGCTT GCGTTTCCCA
CAGGCGGCAG CGCGCATTCA CACCCTGGGG GAACTTGCCG GGCGCAATCG TGACATTCCC
GACCCCTTCA AGATGCAGAT CGGTCCGTGG CTTGTCTATG CGCGAGAAAT CGACCAGATG
CTCCAGCAGG CGCTGCCGCG CATTCTCGCA TTCCTTCCCG AACCATCGGC GCCCTTCGCA
GAACCGGGCA CTGAGAACCG GGAACCGACC CGCGTCACGA CGCTCCTTTC CGGGCGATCC
GCGCCGTTGG TGGCGGAAGA ACGACGCGCC GCCGCCGAAC GCACGGCTCA CCTGCTCGAC
CTGATGACGC GCATTCCCGG TATTGTTGCC TGGAATGCGG CGCGTGAGCA GATCGAAGCC
GCTATCGCGC TTGCACAGGC GCATCCCGCT GACGCAACCG ATCAGATCAC GGCATATTGC
GCCCTCCTCC GCGCGGCGCT CACGCTGACG CCATCCGATC CGGGCGCAGC GCACCTTGCA
GCGTTGCGCG ACGCGATTGT GCGCCTCGAG CAACCGGTTG GAACCAACGA TGTCAGCGAT
CTGTCGGCGC GACTTGGCGG TTGGACATCG CTGAATTAA
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| Protein sequence | MYEPLILIVG AADTGRAPLA AALLRRHLMN HSIPARVESA GVLGHDDDPA SPDALTVAEH
MALDLSAHRA RSLSDHLVEE AILLLAIDSG AARVARLRFP QAAARIHTLG ELAGRNRDIP
DPFKMQIGPW LVYAREIDQM LQQALPRILA FLPEPSAPFA EPGTENREPT RVTTLLSGRS
APLVAEERRA AAERTAHLLD LMTRIPGIVA WNAAREQIEA AIALAQAHPA DATDQITAYC
ALLRAALTLT PSDPGAAHLA ALRDAIVRLE QPVGTNDVSD LSARLGGWTS LN
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