| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3074 |
|---|
| Symbol | |
|---|
| ID | 5540570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 3979650 |
|---|
| End bp | 3980216 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640895193 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001433146 |
|---|
| Protein GI | 156743017 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGTCCG TTTCCCGCCA GTCGATGATC GCCGCGTCGC AGGAAGAACT TGATGCCCTG
GTGCTCAGCG TTGCACTGCG TCAGGGGCAG TGGGAGGAGG ATTATCTATG GTTGAGCGAT
CACGCGAGCA CTCTGGTTGA GTTTACCGAC GGATATATCG ATATTCTGCC GATACCGACC
GACCATCATC AATCAATCCT TCTCTTTCTG TACCGTCTGT TTTTCACTGC GGTTGAATTA
CGCGGCGGCA AAGTGCTGAT TGCACCATTG CGTCTGCGCA TTCGTTCGGG AAAGTATCGC
GAGCTTGATC TGCTGCTGCG TTCGGCGCAT GATGTGCGCC AGCAGGATCG ATCTGGATTG
GCGCCGATCT TGTGCTGGAA GTGGTCAGCC ACGACAAATC CGAACGCGAT CTGGTCGGAA
AACGCAACGA TTACTTCGAA GGGGGCATCC CCGAATACTG GATCGTCAAC TCGCTTGACG
AAACCATCAC GGTATTGCAG CTGGCGAATG GCGCTTACGT CGAACATAGA AGATTTGGGC
GCGGCGTCCA GGCGACATCG GCGCTGA
|
|---|
| Protein sequence | MMSVSRQSMI AASQEELDAL VLSVALRQGQ WEEDYLWLSD HASTLVEFTD GYIDILPIPT
DHHQSILLFL YRLFFTAVEL RGGKVLIAPL RLRIRSGKYR ELDLLLRSAH DVRQQDRSGL
APILCWKWSA TTNPNAIWSE NATITSKGAS PNTGSSTRLT KPSRYCSWRM ALTSNIEDLG
AASRRHRR
|
|---|
| |