| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3062 |
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| Symbol | |
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| ID | 5540558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 3964838 |
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| End bp | 3965821 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640895181 |
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| Product | transketolase central region |
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| Protein accession | YP_001433134 |
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| Protein GI | 156743005 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0022] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTCA TGACGTTTAT CGAAGCGATC CGGTCGGCGT TACACGATGC TATGGCTGCC
GATGATCGGA TTATGGTTCT CGGCGAGGAT GTGGCCGTCA AGGGTGGCGT CTTTCTGGCA
ACCGAAGGGT TGCTGGCGCG TTTTGGCGAA CATCGTGTGA TTGACATGCC GATTGCCGAG
TGCGGTATTG TCGGCGCTGC TATTGGTGCA TCGTTGCACG GTCTTCTGCC GGTCGCCGAG
ATTCAGTTCG CCGACTATAT TTACCCGGCG ATCGATCAGA TTCTCAATGA AGCGGCGCGT
TTTCGCTATC GCTCGAACGG CGACTGGAGT TGCCCGATTG TGGTGCGGGC GCCGTGCGGC
GCCGGCATCC ATGGTGCGCT CTATCATTCA CAGAGTGTCG AACGCCTGTT TACCAGTACG
CCAGGCATTA AAGTGGTCAT CCCATCAACG CCGTTCGACG CCAAAGGGTT GCTGATCGCC
GCAATCTATG ATCCGGATCC GGTGATTTTC TTTGAGCACA AGCAACTCTA CCGTTCGGTG
CGCGGCGATG TGCCCGAAGG ACTCTACCGT GAGCCGATTG GCAAGGCAGT GGTGCGGCGC
AACGGCAGCG ATATGAGTGT GTTCAGTTAT GGGCTGATGG TGCACCATTC CCTGACAGCG
GCGAAAGAAC TGGAAGCCGA GGGGGTCGAT GTCGAAGTCA TCGATCTGCG CACCCTGGCG
CCGCTCGACC GCGATGCGAT CCTGTCGTCT GTCAAAAAGA CGGGTCGTGC ATTGATTGTG
CACGAAGATG TCCTGACCGG TGGGATCGGC GGGGAGATCG CCGCGCTCAT CGCTGAACAT
GCGTTTGAGT ATCTGGATGC ACCGGTTCGC CGTCTCGCAT CCCCCGATCT GTTTGCAACC
CCGTTCGCCG ATCCGCTTGA AGACTATTTC ATGCTCAATC CGCAAAAAAT CGCGGCGGCG
ATGTACGACC TGGCACGCTA CTAA
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| Protein sequence | MPVMTFIEAI RSALHDAMAA DDRIMVLGED VAVKGGVFLA TEGLLARFGE HRVIDMPIAE
CGIVGAAIGA SLHGLLPVAE IQFADYIYPA IDQILNEAAR FRYRSNGDWS CPIVVRAPCG
AGIHGALYHS QSVERLFTST PGIKVVIPST PFDAKGLLIA AIYDPDPVIF FEHKQLYRSV
RGDVPEGLYR EPIGKAVVRR NGSDMSVFSY GLMVHHSLTA AKELEAEGVD VEVIDLRTLA
PLDRDAILSS VKKTGRALIV HEDVLTGGIG GEIAALIAEH AFEYLDAPVR RLASPDLFAT
PFADPLEDYF MLNPQKIAAA MYDLARY
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